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scnpilot_cont_500_p_scaffold_1213

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1213_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..486
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Rhizobium grahamii CCGE 502 RepID=S3H545_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE93592.1}; Flags: Fragment;; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
hypothetical protein
scnpilot_cont_500_p_scaffold_1213_2
unknown

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610..876
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1213_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(789..1676)
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J1T8W4_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ28171.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
Putative choline sulfate-utilization transcription factor
scnpilot_cont_500_p_scaffold_1213_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1786..3039
DNA (1254bp) protein (418aa)
Putative Rieske n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AH38_RHIET rbh
Rieske {ECO:0000313|EMBL:KEC70045.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leg
putative Rieske [2Fe-2S] dioxygenase
scnpilot_cont_500_p_scaffold_1213_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3029..4117
DNA (1089bp) protein (363aa)
Flavodoxin reductase family protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SSE4_9RHIZ rbh
flavodoxin reductase family protein rbh
Flavodoxin reductase family protein {ECO:0000313|EMBL:CDM62678.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
scnpilot_cont_500_p_scaffold_1213_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4424..4996)
DNA (573bp) protein (191aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2JYP6_RHIEC rbh
glutathione-dependent formaldehyde-activating enzyme
scnpilot_cont_500_p_scaffold_1213_7
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5247..5843)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RCM4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL50457.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_1213_8
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5891..7927)
DNA (2037bp) protein (679aa)
stcD; putative N-methylproline demethylase (EC:1.-.-.-)
NADH:flavin oxidoreductase n=1 Tax=Rhizobium sp. CF122 RepID=J2IP24_9RHIZ rbh
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EJL50458.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" s
scnpilot_cont_500_p_scaffold_1213_9
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8074..8706
DNA (633bp) protein (211aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J3BGU2_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL50459.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" so
TetR family transcriptional regulator protein
scnpilot_cont_500_p_scaffold_1213_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8717..9511
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Putative pyrroline-5-carboxylate reductase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2JYN7_RHIEC rbh
pyrroline-5-carboxylate reductase
scnpilot_cont_500_p_scaffold_1213_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10068..10778
DNA (711bp) protein (237aa)
Uncharacterized HTH-type transcriptional regulator ydfH n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AER7_RHIFH rbh
Uncharacterized HTH-type transcriptional regulator ydfH rbh
Regulatory protein, GntR family {ECO:0000313|EMBL:CCE99549.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobi
scnpilot_cont_500_p_scaffold_1213_12
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10775..11686
DNA (912bp) protein (304aa)
dihydrodipicolinate synthase protein (EC:4.3.3.7)
Dihydrodipicolinate synthase protein {ECO:0000313|EMBL:AGS26175.1}; EC=4.3.3.7 {ECO:0000313|EMBL:AGS26175.1};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizob
Dihydrodipicolinate synthase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S8F0_RHIET rbh
scnpilot_cont_500_p_scaffold_1213_13
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11679..13196
DNA (1518bp) protein (506aa)
aldehyde dehydrogenase protein (EC:1.2.1.-)
aldehyde dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000371828A rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EJZ18926.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_cont_500_p_scaffold_1213_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13193..14539
DNA (1347bp) protein (449aa)
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHU1_AGRRK rbh
oxidoreductase
Oxidoreductase protein {ECO:0000313|EMBL:ACM29483.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agro
scnpilot_cont_500_p_scaffold_1213_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14619..15470
DNA (852bp) protein (284aa)
ABC transporter, substrate binding protein (Glycine-betaine) n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSS4_RHIRD rbh
ABC transporter substrate binding protein (Glycine-betaine) {ECO:0000313|EMBL:EGP54239.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Ag
glycine-betaine ABC transporter substrate-binding protein rbh
scnpilot_cont_500_p_scaffold_1213_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15558..16649
DNA (1092bp) protein (364aa)
prov3; putative glycine betaine/proline ABC transporter (ATP-binding protein) (EC:3.6.3.32)
ABC-type proline/glycine betaine transport system (ATP-binding protein) {ECO:0000313|EMBL:CCE99554.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CCE99554.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alph
Putative glycine betaine/proline ABC transporter (ATP-binding protein) n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AES2_RHIFH rbh
scnpilot_cont_500_p_scaffold_1213_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16664..17512
DNA (849bp) protein (283aa)
prow3; glycine betaine/L-proline ABC transporter,permease protein, putative (EC:3.6.3.32)
Glycine betaine/L-proline ABC transporter, permease {ECO:0000313|EMBL:CCE99555.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CCE99555.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Glycine betaine/L-proline ABC transporter,permease protein, putative n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AES3_RHIFH rbh
scnpilot_cont_500_p_scaffold_1213_18
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17509..18366
DNA (858bp) protein (286aa)
UPI0003CE168F related cluster n=1 Tax=unknown RepID=UPI0003CE168F rbh
ABC transporter permease {ECO:0000313|EMBL:ESY73426.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
prow5; Glycine betaine/L-proline transport system permease protein proW rbh
scnpilot_cont_500_p_scaffold_1213_19
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18485..19483
DNA (999bp) protein (333aa)
UPI0003CE7F4C related cluster n=1 Tax=unknown RepID=UPI0003CE7F4C rbh
Hydroxyproline-2-epimerase {ECO:0000313|EMBL:ESY73427.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
hydroxyproline-2-epimerase rbh
scnpilot_cont_500_p_scaffold_1213_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19510..20496
DNA (987bp) protein (329aa)
Putative transcriptional regulator protein, AraC family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UEJ9_9RHIZ rbh
Putative transcriptional regulator protein, AraC family {ECO:0000313|EMBL:ENN88573.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
AraC family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_1213_21
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20665..20829
DNA (165bp) protein (55aa)
Uncharacterized protein n=4 Tax=Brucella RepID=N7QBS1_9RHIZ
Transposase {ECO:0000313|EMBL:EEY24697.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
tnp; transposase
scnpilot_cont_500_p_scaffold_1213_22
Vibrio coralliilyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21016..21453)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Vibrio coralliilyticus OCN008 RepID=U0ETV3_9VIBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW21134.1}; TaxID=190893 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio coralliilyticus.;"
Displaying 22 items

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