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scnpilot_cont_500_p_scaffold_1220

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1220_1
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86..1096)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C182D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ35161.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_1220_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1472..2074
DNA (603bp) protein (201aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
superoxide dismutase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C3522 rbh
Superoxide dismutase
scnpilot_cont_500_p_scaffold_1220_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2226..3881
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PTB1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42770.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_4
bacterium YEK0313, Bacteria

Not on your lists

comp(4107..5495)
DNA (1389bp) protein (463aa)
cytosolic non-specific dipeptidase (EC:3.4.13.18)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDC01C rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEJ09950.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_cont_500_p_scaffold_1220_5
Brucella ceti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5627..6016
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=2 Tax=Brucella ceti RepID=C9T419_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEH14946.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella ceti str. Cudo.;"
scnpilot_cont_500_p_scaffold_1220_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6047..6454
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UI12_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13701.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6536..7396
DNA (861bp) protein (287aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IAI9_9BRAD
scnpilot_cont_500_p_scaffold_1220_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7393..7758
DNA (366bp) protein (122aa)
folB; dihydroneopterin aldolase FolB (EC:4.1.2.25)
Dihydroneopterin aldolase n=2 Tax=Oligotropha carboxidovorans RepID=B6JG22_OLICO
Dihydroneopterin aldolase {ECO:0000313|EMBL:KIZ40449.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_1220_9
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7767..8255
DNA (489bp) protein (163aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YRH3_BRASO
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) {ECO:0000
scnpilot_cont_500_p_scaffold_1220_10
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8289..10148
DNA (1860bp) protein (620aa)
mutA; methylmalonyl-CoA mutase small subunit (EC:5.4.99.2)
MutA protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QR8_BRADU
Uncharacterized protein {ECO:0000313|EMBL:EJZ31834.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
scnpilot_cont_500_p_scaffold_1220_11
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10145..12313
DNA (2169bp) protein (723aa)
Methylmalonyl-CoA mutase large subunit n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZAX7_9BRAD
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:BAM90914.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br
methylmalonyl-CoA mutase large subunit
scnpilot_cont_500_p_scaffold_1220_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12310..13107
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PW23_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13707.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13104..14114
DNA (1011bp) protein (337aa)
LAO/AO transport system ATPase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139T2_RHOPS
arginine/ornithine transport system ATPase
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABE39157.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseu
scnpilot_cont_500_p_scaffold_1220_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14134..15438)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJS5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66868.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15561..16145)
DNA (585bp) protein (195aa)
glutathione S-transferase n=1 Tax=Afipia birgiae RepID=UPI0002D69C55
Uncharacterized protein {ECO:0000313|EMBL:EKS36290.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16267..16896
DNA (630bp) protein (210aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase {ECO:0000313|EMBL:AEI07258.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEI07258.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotr
Methyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBK8_OLICO
scnpilot_cont_500_p_scaffold_1220_17
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16991..17647)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5V2_9BRAD
conserved exported hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88674.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
scnpilot_cont_500_p_scaffold_1220_18
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17833..18036)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B60476
ATP/GTP-binding site motif A (P-loop) protein {ECO:0000313|EMBL:EAV44489.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source
ATP/GTP-binding site motif A, P-loop protein
scnpilot_cont_500_p_scaffold_1220_19
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18322..18699
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YU62_BRASO
Uncharacterized protein {ECO:0000313|EMBL:CAL77438.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18790..19761)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ84_9BRAD
Membrane protein {ECO:0000313|EMBL:KIZ33327.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
import inner membrane translocase, subunit Tim44
scnpilot_cont_500_p_scaffold_1220_21
unknown

Not on your lists

comp(19900..20103)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1220_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20192..22828)
DNA (2637bp) protein (879aa)
PAS sensor protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C4B73
Putative histidine kinase {ECO:0000313|EMBL:KGJ66277.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium d
two-component hybrid sensor and regulator
scnpilot_cont_500_p_scaffold_1220_23
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22985..24055)
DNA (1071bp) protein (357aa)
flagellar biosynthesis protein FlhB n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DD735
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KJC39528.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
flagellar biosynthesis protein FlhB
scnpilot_cont_500_p_scaffold_1220_24
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24069..24836)
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein fliR n=1 Tax=Rhodovulum sp. PH10 RepID=J9DW83_9RHOB rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod
flagellar biosynthetic protein FliR
scnpilot_cont_500_p_scaffold_1220_25
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24843..25109)
DNA (267bp) protein (89aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Rhodovulum sp. PH10 RepID=J9DCU1_9RHOB
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:EJW09378.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
fliQ; flagellar biosynthesis protein FliQ
scnpilot_cont_500_p_scaffold_1220_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25156..25479)
DNA (324bp) protein (108aa)
Flagellar hook-basal body complex protein FliE n=2 Tax=Rhodopseudomonas palustris RepID=B3QIA5_RHOPT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
fliE; flagellar hook-basal body protein FliE
scnpilot_cont_500_p_scaffold_1220_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25491..25901)
DNA (411bp) protein (137aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDH1_9RHOB
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rh
flgC; flagellar basal-body rod protein FlgC
scnpilot_cont_500_p_scaffold_1220_28
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25948..26376)
DNA (429bp) protein (143aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Rhodovulum sp. PH10 RepID=J9A0U2_9RHOB
Flagellar basal-body rod protein FlgB {ECO:0000313|EMBL:EJW09375.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod
flgB; flagellar basal body rod protein FlgB
scnpilot_cont_500_p_scaffold_1220_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26649..27650
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N308_RHOPA
Uncharacterized protein {ECO:0000313|EMBL:KIZ41669.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_cont_500_p_scaffold_1220_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27647..28402
DNA (756bp) protein (252aa)
Flagellar biosynthesis protein FliP n=1 Tax=Rhodovulum sp. PH10 RepID=J5PQ63_9RHOB rbh
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:EJW12362.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
fliP; flagellar biosynthesis protein FliP
Displaying items 1-30 of 38 in total

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