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scnpilot_cont_500_p_scaffold_1242

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1242_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..488
DNA (486bp) protein (162aa)
Protein FdhE homolog n=2 Tax=Oligotropha carboxidovorans RepID=B6JC79_OLICO
fdhE; formate dehydrogenase accessory protein FdhE
Formate dehydrogenase accessory protein FdhE {ECO:0000313|EMBL:AEI07499.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="
scnpilot_cont_500_p_scaffold_1242_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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499..1908
DNA (1410bp) protein (470aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
selA; L-seryl-tRNA selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X3_9BRAD
scnpilot_cont_500_p_scaffold_1242_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1908..2702
DNA (795bp) protein (265aa)
Sel1-like repeat protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BMH0_OLICM
Putative beta-lactamase HcpC {ECO:0000313|EMBL:CEG07220.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
Sel1-like repeat-containing protein
scnpilot_cont_500_p_scaffold_1242_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2699..4798
DNA (2100bp) protein (700aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X1_9BRAD
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EFI52301.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
selB2; selenocysteine-specific elongation factor SelB
scnpilot_cont_500_p_scaffold_1242_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4795..5286
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07221.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_cont_500_p_scaffold_1242_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5414..5722
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52299.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1242_7
bacterium YEK0313, Bacteria

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5719..6492
DNA (774bp) protein (258aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJD5_9PROT
Octanoyltransferase LipM {ECO:0000313|EMBL:CEJ13945.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
lipoate--protein ligase
scnpilot_cont_500_p_scaffold_1242_8
bacterium YEK0313, Bacteria

Not on your lists

6489..6866
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1ADP7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ13944.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1242_9

Not on your lists

6879..7343
DNA (465bp) protein (155aa)
Glycine cleavage system H protein n=1 Tax=mine drainage metagenome RepID=T0Z8X3_9ZZZZ
Glycine cleavage system H protein {ECO:0000313|EMBL:EQD41473.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycine cleavage system protein H
scnpilot_cont_500_p_scaffold_1242_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7340..8389)
DNA (1050bp) protein (350aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W8_9BRAD
scnpilot_cont_500_p_scaffold_1242_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8573..9901)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003686C50 rbh
Sulfide dehydrogenase (Flavocytochrome), flavoprotein subunit {ECO:0000313|EMBL:EED65787.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_cont_500_p_scaffold_1242_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10152..11657)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036E7D3A rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
guaD; guanine deaminase
scnpilot_cont_500_p_scaffold_1242_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11717..12673)
DNA (957bp) protein (319aa)
dihydroorotate dehydrogenase family protein; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
dihydroorotate dehydrogenase protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKT3_DESK7
scnpilot_cont_500_p_scaffold_1242_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12660..13457)
DNA (798bp) protein (266aa)
Oxidoreductase FAD-binding domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULA3_METS4
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
oxidoreductase FAD-binding subunit
scnpilot_cont_500_p_scaffold_1242_15
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13515..14537)
DNA (1023bp) protein (341aa)
L-asparaginase 1 {ECO:0000313|EMBL:EXJ10976.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EXJ10976.1};; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source
ansA; cytoplasmic asparaginase I (EC:3.5.1.1)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003607982
scnpilot_cont_500_p_scaffold_1242_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14591..15274)
DNA (684bp) protein (228aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KGZ7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE52915.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF31
gntR; GntR domain-containing protein
scnpilot_cont_500_p_scaffold_1242_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15309..16469)
DNA (1161bp) protein (387aa)
UPI0003D0622A related cluster n=1 Tax=unknown RepID=UPI0003D0622A
peptidase M20 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
peptidase M20
scnpilot_cont_500_p_scaffold_1242_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16649..17929
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKS5_METNO rbh
ProP protein {ECO:0000313|EMBL:BAQ43646.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_1242_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18083..20422
DNA (2340bp) protein (780aa)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZV93_9BRAD
xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein
scnpilot_cont_500_p_scaffold_1242_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20419..21249
DNA (831bp) protein (277aa)
molybdopterin dehydrogenase FAD-binding; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003098B4F
molybdopterin dehydrogenase FAD-binding
Displaying 20 items

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