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scnpilot_cont_500_p_scaffold_1270

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1270_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..2869)
DNA (2868bp) protein (956aa)
5-oxoprolinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036DA63B
N-methylhydantoinase
N-methylhydantoinase {ECO:0000313|EMBL:BAF86166.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodan
scnpilot_cont_500_p_scaffold_1270_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3053..4027
DNA (975bp) protein (325aa)
TRAP transporter solute receptor n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBM2_9RHOB rbh
TRAP transporter solute receptor {ECO:0000313|EMBL:EJW10089.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulu
Extracellular solute-binding protein, family 7
scnpilot_cont_500_p_scaffold_1270_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4076..4633
DNA (558bp) protein (186aa)
TRAP dicarboxylate transporter, DctQ subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6IXZ8_9RHOB
TRAP dicarboxylate transporter, DctQ subunit {ECO:0000313|EMBL:EJW10090.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sourc
tripartite ATP-independent periplasmic transporter DctQ component
scnpilot_cont_500_p_scaffold_1270_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4633..5940
DNA (1308bp) protein (436aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAH3_9RHOB rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EJW10091.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sourc
dctM3; TRAP dicarboxylate transporter, subunit DctM
scnpilot_cont_500_p_scaffold_1270_5

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comp(5951..6832)
DNA (882bp) protein (294aa)
Putative transmembrane protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSY6_AZOC5
EamA-like transporter family {ECO:0000313|EMBL:AIA15484.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transmembrane protein
scnpilot_cont_500_p_scaffold_1270_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7468..8256)
DNA (789bp) protein (263aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLR5_RHOPX
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ADU43426.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
scnpilot_cont_500_p_scaffold_1270_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8421..8984)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UGW2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13156.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
PRC-barrel domain-containing protein
scnpilot_cont_500_p_scaffold_1270_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10338
DNA (1080bp) protein (360aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RSMH_RHOP2
mraW; S-adenosyl-methyltransferase MraW
scnpilot_cont_500_p_scaffold_1270_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10340..10708
DNA (369bp) protein (123aa)
Isoquinoline 1-oxidoreductase, alpha subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ILA1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC61133.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_cont_500_p_scaffold_1270_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10708..12459
DNA (1752bp) protein (584aa)
Cell division protein FtsI {ECO:0000313|EMBL:EGP06268.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EGP06268.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein n=1 Tax=Afipia birgiae RepID=UPI00031F6FC2
scnpilot_cont_500_p_scaffold_1270_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12456..13910
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Afipia birgiae RepID=UPI00036FAFC7
scnpilot_cont_500_p_scaffold_1270_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13907..15340
DNA (1434bp) protein (478aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteoba
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Rhodovulum sp. PH10 RepID=J6JDM0_9RHOB rbh
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
scnpilot_cont_500_p_scaffold_1270_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15434..16519
DNA (1086bp) protein (362aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MRAY_NITHX
scnpilot_cont_500_p_scaffold_1270_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16523..17905
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZT5_9BRAD
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
scnpilot_cont_500_p_scaffold_1270_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17985..19127
DNA (1143bp) protein (381aa)
cell division protein FtsW n=1 Tax=Afipia birgiae RepID=UPI0002DBA420
Cell division protein FtsW {ECO:0000313|EMBL:ETR78849.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ftsW; cell division protein FtsW
scnpilot_cont_500_p_scaffold_1270_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19128..20231
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UGW8_9RHOB rbh
scnpilot_cont_500_p_scaffold_1270_17
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20272..20904
DNA (633bp) protein (211aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVE7_9BRAD
Displaying 17 items

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