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scnpilot_cont_500_p_scaffold_1386

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1386_1
unknown

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3..122
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1386_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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119..1441
DNA (1323bp) protein (441aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJX6_9RHOB rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EJW11182.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sourc
3-deoxy-D-manno-octulosonic-acid transferase
scnpilot_cont_500_p_scaffold_1386_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1464..2465
DNA (1002bp) protein (334aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; TaxID=460265 species="Bacteria;
Tetraacyldisaccharide 4'-kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=LPXK_METNO rbh
scnpilot_cont_500_p_scaffold_1386_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2466..2792)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0E9_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91270.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain
scnpilot_cont_500_p_scaffold_1386_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2827..3660
DNA (834bp) protein (278aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I5V0_9BRAD
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJN15903.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobiu
putative dienelactone hydrolase family protein
scnpilot_cont_500_p_scaffold_1386_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3764..4123
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RS7_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05357.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
scnpilot_cont_500_p_scaffold_1386_7
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4202..6382
DNA (2181bp) protein (727aa)
Putative outer membrane hemin/siderophore receptor protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YPJ5_BRASO
outer membrane hemin/siderophore receptor protein
Putative outer membrane hemin/siderophore receptor protein {ECO:0000313|EMBL:CAL75821.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhiz
scnpilot_cont_500_p_scaffold_1386_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6386..7918)
DNA (1533bp) protein (511aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYZ3_RHOP2
scnpilot_cont_500_p_scaffold_1386_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8037..9320
DNA (1284bp) protein (428aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPI6_NITWN
scnpilot_cont_500_p_scaffold_1386_10
unknown

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9565..9816
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1386_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9931..10833
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLI9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJW11557.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
Alpha/beta hydrolase
scnpilot_cont_500_p_scaffold_1386_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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10842..11921
DNA (1080bp) protein (360aa)
Phosphotransferase enzyme family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J009_POLGS rbh
phosphotransferase enzyme family protein
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:ADZ71844.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
scnpilot_cont_500_p_scaffold_1386_13
unknown

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12003..12179
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1386_14
bacterium YEK0313, Bacteria

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comp(12186..12626)
DNA (441bp) protein (147aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
tRNA-adenosine deaminase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIP0_NITHX
zinc-binding CMP/dCMP deaminase
scnpilot_cont_500_p_scaffold_1386_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12736..13878
DNA (1143bp) protein (381aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
Pseudouridine synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJ77_9RHOB
RNA-binding S4 domain-containing protein
scnpilot_cont_500_p_scaffold_1386_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13878..14438
DNA (561bp) protein (187aa)
methyltransferase (EC:2.1.1.-)
Putative methyltransferase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZY5_9BRAD
DNA methyltransferase {ECO:0000313|EMBL:ETR78539.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_cont_500_p_scaffold_1386_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14435..16252)
DNA (1818bp) protein (606aa)
DNA mismatch repair protein MutL n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TK36_9BRAD
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
mutL; DNA mismatch repair protein
scnpilot_cont_500_p_scaffold_1386_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16365..16784)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369929F
Class I peptide chain release factor {ECO:0000313|EMBL:KFC72809.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC8
class I peptide chain release factor
scnpilot_cont_500_p_scaffold_1386_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16819..18144)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM07_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29479.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
peptidase M16 domain-containing protein
scnpilot_cont_500_p_scaffold_1386_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18141..19517)
DNA (1377bp) protein (459aa)
Protease n=1 Tax=Rhodovulum sp. PH10 RepID=J6IWS0_9RHOB
Zn-dependent protease
Zinc protease {ECO:0000313|EMBL:ETR78542.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Displaying 20 items

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