ggKbase home page

scnpilot_cont_500_p_scaffold_1412

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1412_1
Corynebacterium urealyticum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..356)
DNA (354bp) protein (118aa)
Adenylate cyclase, putative {ECO:0000313|EMBL:CAQ05806.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CAQ05806.1};; TaxID=504474 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacte
Adenylate cyclase n=1 Tax=Corynebacterium urealyticum DSM 7111 RepID=M4KDS8_9CORY
adenylate cyclase
scnpilot_cont_500_p_scaffold_1412_2
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

611..1081
DNA (471bp) protein (157aa)
AAA ATPase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H866_CELFA
DNA polymerase III subunit delta {ECO:0000313|EMBL:KGM00725.1}; Flags: Fragment;; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomona
AAA ATPase
scnpilot_cont_500_p_scaffold_1412_3
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1180..1692)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL05029.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_cont_500_p_scaffold_1412_4
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1881..2156
DNA (276bp) protein (92aa)
Putative transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WWP3_9PSEU
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGI70149.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;
ArsR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1412_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2153..2647
DNA (495bp) protein (165aa)
Activator of Hsp90 ATPase 1 family protein n=2 Tax=Mycobacterium RepID=A1UIY3_MYCSK
ATPase {ECO:0000313|EMBL:KGM36071.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
activator of Hsp90 ATPase 1 family protein
scnpilot_cont_500_p_scaffold_1412_6
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2898..3272
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037A3AE1
Cytoplasmic protein {ECO:0000313|EMBL:KHO26746.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1412_7
unknown

Not on your lists

3387..3806
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1412_8
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4040..5536
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036877ED
Uncharacterized protein {ECO:0000313|EMBL:KEP24204.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
HNH nuclease
scnpilot_cont_500_p_scaffold_1412_9
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5664..7574)
DNA (1911bp) protein (637aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A1S3_MAHA5 rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:AEE97123.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis;
scnpilot_cont_500_p_scaffold_1412_10
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7698..8822)
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
Two-component system histidine kinase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SMK7_AMYOR
baeS; two-component system histidine kinase
scnpilot_cont_500_p_scaffold_1412_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8866..9591)
DNA (726bp) protein (242aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRR1_PSEUX
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA27278.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_1412_12
unknown

Not on your lists

comp(9602..10066)
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1412_13
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10063..10512)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037ED6F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIF01519.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
scnpilot_cont_500_p_scaffold_1412_14
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10620..12173
DNA (1554bp) protein (518aa)
TAP domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H868_CELFA
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:AEE44625.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 201
scnpilot_cont_500_p_scaffold_1412_15
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12649..13314
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H882_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44639.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
scnpilot_cont_500_p_scaffold_1412_16
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13490..14926)
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIJ5_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73494.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482
scnpilot_cont_500_p_scaffold_1412_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15057..16034
DNA (978bp) protein (326aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H884_CELFA
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEE44641.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cell
scnpilot_cont_500_p_scaffold_1412_18
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16031..16627
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E95C6B
Uncharacterized protein {ECO:0000313|EMBL:KFD43305.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1412_19
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16797..17870)
DNA (1074bp) protein (358aa)
ATP-dependent DNA ligase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002FAE987
DNA polymerase LigD, polymerase domain-containing protein
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADG73496.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fla
scnpilot_cont_500_p_scaffold_1412_20
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17894..20287)
DNA (2394bp) protein (798aa)
Transcriptional regulator, LuxR family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H893_CELFA
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEE44650.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strai
scnpilot_cont_500_p_scaffold_1412_21
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20284..20679)
DNA (396bp) protein (132aa)
hypothetical protein, partial n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00036E419B
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEG45582.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabi
scnpilot_cont_500_p_scaffold_1412_22
unknown

Not on your lists

comp(20661..20882)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1412_23
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21168..21407
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HCE7_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL90684.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
scnpilot_cont_500_p_scaffold_1412_24
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21454..21864
DNA (411bp) protein (137aa)
Signal transduction histidine kinase, LytS n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIJ9_CELFN
Histidine kinase {ECO:0000313|EMBL:KGM00483.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
signal transduction histidine kinase LytS
scnpilot_cont_500_p_scaffold_1412_25
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22110..23459
DNA (1350bp) protein (450aa)
ATPase involved in chromosome partitioning n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4N2_CELGA
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AEI10848.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (s
scnpilot_cont_500_p_scaffold_1412_26
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23850..24428
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4N3_CELGA
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI10849.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilv
scnpilot_cont_500_p_scaffold_1412_27
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24992..26140
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIK2_CELFN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73501.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482
scnpilot_cont_500_p_scaffold_1412_28
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26407..27327
DNA (921bp) protein (307aa)
5''''-3'''' exonuclease n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D47233
5'-3' exonuclease
5'-3' exonuclease {ECO:0000313|EMBL:KGM01817.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
scnpilot_cont_500_p_scaffold_1412_29
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27337..27861)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIK4_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73503.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482
scnpilot_cont_500_p_scaffold_1412_30
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27917..28495)
DNA (579bp) protein (193aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:AEE44680.1}; EC=2.1.1.77 {ECO:0000313|EMBL:AEE44680.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellul
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GY12_CELFA
Displaying items 1-30 of 36 in total

View Taxonomy