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scnpilot_cont_500_p_scaffold_1476

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1476_1
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)
Sugar ABC transporter permease n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH77_9RHOB
Sugar ABC transporter permease {ECO:0000313|EMBL:EAR51934.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola g
ABC-type uncharacterized transport system, permease component
scnpilot_cont_500_p_scaffold_1476_2
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(723..2333)
DNA (1611bp) protein (537aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH78_9RHOB rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EAR51933.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="O
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_1476_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..3449)
DNA (1038bp) protein (346aa)
ABC-type transport system substrate-binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH79_9RHOB rbh
Basic membrane family protein {ECO:0000313|EMBL:AID34980.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
nucleoside-binding protein
scnpilot_cont_500_p_scaffold_1476_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4535)
DNA (975bp) protein (325aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH87_9RHOB rbh
Inosine-uridine preferring nucleoside hydrolase family protein {ECO:0000313|EMBL:AID34963.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Meso
ybeK; pyrimidine-specific ribonucleoside hydrolase RihA
scnpilot_cont_500_p_scaffold_1476_5
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4737..5375
DNA (639bp) protein (213aa)
Bacterial regulatory protein, GntR family protein 19 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFL6_ACHXA
GntR family transcriptional regulator {ECO:0000313|EMBL:KGD94238.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
Transcriptional regulator
scnpilot_cont_500_p_scaffold_1476_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5383..6132
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas putida S16 RepID=F8G555_PSEPU
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEJ13914.1}; TaxID=1042876 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
scnpilot_cont_500_p_scaffold_1476_7
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..6716
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036B65D5
metal-dependent phosphohydrolase
Metal-dependent phosphohydrolase HD sub domain {ECO:0000313|EMBL:ABY31576.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;"
scnpilot_cont_500_p_scaffold_1476_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6976..7935)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CNQ3_RHILT rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC85542.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_1476_9
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8259..8450
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Gluconobacter thailandicus NBRC 3255 RepID=M9MM44_GLUTH
Uncharacterized protein {ECO:0000313|EMBL:GAC89484.1}; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter
scnpilot_cont_500_p_scaffold_1476_10
unknown

Not on your lists

comp(8440..8550)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1476_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8644..9759)
DNA (1116bp) protein (372aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
hisC3; Histidinol-phosphate aminotransferase 3 (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHW6_9RHIZ rbh
scnpilot_cont_500_p_scaffold_1476_12
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9880..10650
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I3U4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL50510.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
scnpilot_cont_500_p_scaffold_1476_13
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10937..12265
DNA (1329bp) protein (443aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD2; Histidinol dehydrogenase 2 (EC:1.1.1.23)
histidinol dehydrogenase n=1 Tax=Rhizobium RepID=UPI00037B67E2
scnpilot_cont_500_p_scaffold_1476_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12270..13283
DNA (1014bp) protein (338aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF122 RepID=J2RCR8_9RHIZ
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EJL50512.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
dehydrogenase
scnpilot_cont_500_p_scaffold_1476_15
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13296..14048
DNA (753bp) protein (251aa)
histidine utilization repressor n=1 Tax=Rhizobium RepID=UPI00036EABB6 rbh
Histidine utilization repressor {ECO:0000313|EMBL:EJL50513.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
hutC; histidine utilization repressor
scnpilot_cont_500_p_scaffold_1476_16
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14071..15360
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000375FA24 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM61854.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_cont_500_p_scaffold_1476_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15365..16522
DNA (1158bp) protein (386aa)
L-lactate dehydrogenase {ECO:0000313|EMBL:EYR82537.1}; EC=1.1.2.3 {ECO:0000313|EMBL:EYR82537.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shine
L-lactate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00038187A9 rbh
FMN-dependent dehydrogenase
scnpilot_cont_500_p_scaffold_1476_18
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16651..17667
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Rhizobium RepID=UPI00036C3EB0 rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:CDM61852.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
scnpilot_cont_500_p_scaffold_1476_19
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17691..18551
DNA (861bp) protein (287aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J2RCU1_9RHIZ rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJL50517.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
scnpilot_cont_500_p_scaffold_1476_20
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18553..19335
DNA (783bp) protein (261aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium gallicum RepID=UPI00035D07D0 rbh
putative ABC transporter ATP-binding protein MJ0412
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EJL50518.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
scnpilot_cont_500_p_scaffold_1476_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19450..21081)
DNA (1632bp) protein (544aa)
Putative ATP-dependent RNA helicase RhlE n=1 Tax=Octadecabacter arcticus 238 RepID=M9RLS7_9RHOB
Superfamily II RNA helicase {ECO:0000313|EMBL:EJZ34076.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
RNA helicase
scnpilot_cont_500_p_scaffold_1476_22
unknown

Not on your lists

comp(21081..21521)
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1476_23
unknown

Not on your lists

comp(21524..22111)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1476_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22705..23067
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI000380F1F9
Uncharacterized protein {ECO:0000313|EMBL:KEA07891.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_1476_25
unknown

Not on your lists

comp(23437..24156)
DNA (720bp) protein (240aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1476_26
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24108..24587)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A5U3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KJF65272.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Hypothetical protein
scnpilot_cont_500_p_scaffold_1476_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24860..25603
DNA (744bp) protein (248aa)
Putative two-component response regulator transcriptional regulatory protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UB53_9RHIZ rbh
Putative two-component response regulator transcriptional regulatory protein {ECO:0000313|EMBL:ENN89754.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
two-component response regulator protein rbh
scnpilot_cont_500_p_scaffold_1476_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25600..26859
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Putative transmembrane two-component sensor histidine kinase transcriptional regulatory protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7E1_9RHIZ rbh
two-component sensor histidine kinase
Displaying 28 items

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