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scnpilot_cont_500_p_scaffold_1484

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1484_1
unknown

Not on your lists

comp(831..1235)
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1484_2
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1406..1564)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3T0_GEODF
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG58410.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LL
scnpilot_cont_500_p_scaffold_1484_3
unknown

Not on your lists

comp(1759..1941)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1484_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2001..2408
DNA (408bp) protein (136aa)
Allergen V5/Tpx-1 related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IWG7_RHOP2
Allergen V5/Tpx-1 related
Allergen V5/Tpx-1 related {ECO:0000313|EMBL:ABD07443.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sou
scnpilot_cont_500_p_scaffold_1484_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2555..3307
DNA (753bp) protein (251aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211V8_RHOPB
hypothetical protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD88828.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
scnpilot_cont_500_p_scaffold_1484_6
unknown

Not on your lists

comp(3376..3828)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1484_7
bacterium YEK0313, Bacteria

Not on your lists

3866..4327
DNA (462bp) protein (154aa)
ribosomal protein L11 methyltransferase n=1 Tax=Xanthobacteraceae RepID=UPI0003675640
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:CEJ15688.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
50S ribosomal protein L11 methyltransferase
scnpilot_cont_500_p_scaffold_1484_8
unknown

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comp(4344..4514)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1484_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4776..6605
DNA (1830bp) protein (610aa)
peptidase M24 (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLB6_9RHOB rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EJW11507.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10
scnpilot_cont_500_p_scaffold_1484_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..7819
DNA (1215bp) protein (405aa)
multidrug transporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4D4A8 rbh
Major facilitator transporter {ECO:0000313|EMBL:ETR78863.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;
major facilitator superfamily transporter
scnpilot_cont_500_p_scaffold_1484_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..9981)
DNA (2166bp) protein (722aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFY6_9BRAD
scnpilot_cont_500_p_scaffold_1484_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9986..11689)
DNA (1704bp) protein (568aa)
DNA repair protein RecN n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZS3_9BRAD
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brad
DNA repair protein RecN
scnpilot_cont_500_p_scaffold_1484_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11856..12725)
DNA (870bp) protein (290aa)
Outer membrane protein assembly factor BamD n=1 Tax=Rhodovulum sp. PH10 RepID=J5PH02_9RHOB rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
hypothetical protein
scnpilot_cont_500_p_scaffold_1484_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12890..13900)
DNA (1011bp) protein (337aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBA9_9RHOB rbh
scnpilot_cont_500_p_scaffold_1484_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14206..15930)
DNA (1725bp) protein (575aa)
cell division protein FtsZ n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003784188
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopse
ftsZ; cell division protein FtsZ
scnpilot_cont_500_p_scaffold_1484_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15986..17305)
DNA (1320bp) protein (440aa)
Cell division protein ftsA n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBB4_9RHOB rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp
ftsA; cell division protein FtsA
scnpilot_cont_500_p_scaffold_1484_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17302..18219)
DNA (918bp) protein (306aa)
Cell division protein FtsQ n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3H3_9BRAD
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopse
ftsQ; cell division protein FtsQ
scnpilot_cont_500_p_scaffold_1484_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18216..19163)
DNA (948bp) protein (316aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase Ddl (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBX3_9BRAD
scnpilot_cont_500_p_scaffold_1484_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19283..20044
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDZ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36588.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_cont_500_p_scaffold_1484_20
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20163..21077)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBC1_9RHOB rbh
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
scnpilot_cont_500_p_scaffold_1484_21
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21074..21778)
DNA (705bp) protein (235aa)
glutamine amidotransferase (EC:6.3.5.2)
Glutamine amidotransferase class-I n=1 Tax=Rhodovulum sp. PH10 RepID=J6LKA6_9RHOB
Glutamine amidotransferase class-I {ECO:0000313|EMBL:EJW13168.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovu
scnpilot_cont_500_p_scaffold_1484_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21800..22549)
DNA (750bp) protein (250aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; Ta
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=MURC_RHOP5
Displaying 22 items

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