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scnpilot_cont_500_p_scaffold_1578

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1578_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1186)
DNA (1185bp) protein (395aa)
NADH-quinone oxidoreductase subunit F 1 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ISB0_9BRAD
NADH-quinone oxidoreductase subunit F 1 {ECO:0000313|EMBL:ERF85679.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
nuoF; NADH dehydrogenase I subunit F
scnpilot_cont_500_p_scaffold_1578_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1189..1941)
DNA (753bp) protein (251aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain E n=1 Tax=Rhodovulum sp. PH10 RepID=J6J1L0_9RHOB rbh
NADH-ubiquinone oxidoreductase chain E {ECO:0000313|EMBL:EJW10820.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rho
scnpilot_cont_500_p_scaffold_1578_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1938..3128)
DNA (1191bp) protein (397aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAL0_9BRAD
scnpilot_cont_500_p_scaffold_1578_4
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3133..3576)
DNA (444bp) protein (148aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000313|EMBL:KFC94758.1}; EC=4.4.-.- {ECO:0000313|EMBL:KFC94758.1};; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ent
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E004F
aldehyde-activating protein
scnpilot_cont_500_p_scaffold_1578_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3576..4004)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000360B578
Uncharacterized protein {ECO:0000313|EMBL:EKS28023.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
thioesterase
scnpilot_cont_500_p_scaffold_1578_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4642)
DNA (639bp) protein (213aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C n=1 Tax=Afipia felis ATCC 53690 RepID=K8NBP0_AFIFE
scnpilot_cont_500_p_scaffold_1578_7
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4660..4989)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SVV6_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EGP47887.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insu
hypothetical protein
scnpilot_cont_500_p_scaffold_1578_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4994..5554)
DNA (561bp) protein (187aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7W8_BRAJP
nuoB; NADH ubiquinone oxidoreductase chain B
scnpilot_cont_500_p_scaffold_1578_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5562..5927)
DNA (366bp) protein (122aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH dehydrogenase subunit A (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A459AE
scnpilot_cont_500_p_scaffold_1578_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6535..6834
DNA (300bp) protein (100aa)
Histone-like DNA-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QMB1_9BRAD
Histone-like DNA-binding protein {ECO:0000313|EMBL:EGP08114.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacteri
histone-like DNA-binding protein
scnpilot_cont_500_p_scaffold_1578_11
unknown

Not on your lists

comp(6998..7228)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1578_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7315..8289)
DNA (975bp) protein (325aa)
Bll6470 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G75_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ66874.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
scnpilot_cont_500_p_scaffold_1578_13
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..9053)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035F5567
glutathione S-transferase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
glutathione S-transferase domain-containing protein
scnpilot_cont_500_p_scaffold_1578_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9102..9902)
DNA (801bp) protein (267aa)
Polysaccharide deacetylase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEQ6_9RHOB
Polysaccharide deacetylase {ECO:0000313|EMBL:EJW12116.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_1578_15
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10179..10856
DNA (678bp) protein (226aa)
TetR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVG8_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:ETF03348.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren
psrA; Transcriptional regulator PsrA
scnpilot_cont_500_p_scaffold_1578_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11089..13509)
DNA (2421bp) protein (807aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH27_9BRAD rbh
lon; ATP-dependent protease LA
scnpilot_cont_500_p_scaffold_1578_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13826..15106)
DNA (1281bp) protein (427aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=CLPX_RHOP2
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudom
scnpilot_cont_500_p_scaffold_1578_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15423..16058)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92) rbh
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Xanthobacteraceae RepID=UPI00035D2927 rbh
scnpilot_cont_500_p_scaffold_1578_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16174..17553)
DNA (1380bp) protein (460aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHS8_AFIFE
tig; trigger factor Tig
scnpilot_cont_500_p_scaffold_1578_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17810..18772)
DNA (963bp) protein (321aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07NN9_RHOP5
carbohydrate kinase, YjeF-like protein
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ABJ06445.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodops
scnpilot_cont_500_p_scaffold_1578_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19292..19630
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II (GlnB, GlnK) n=3 Tax=Labrenzia RepID=A0NTA5_9RHOB
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EKS28005.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC
nitrogen regulatory protein P-II
scnpilot_cont_500_p_scaffold_1578_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..19856
DNA (159bp) protein (53aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae;
glutamine synthetase n=1 Tax=Xanthobacteraceae RepID=UPI00036D0494
glutamine synthetase
Displaying 22 items

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