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scnpilot_cont_500_p_scaffold_1596

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1596_1
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..821
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036A98E5 rbh
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) {ECO:0000313|EMBL:CEL12964.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1596_2
unknown

Not on your lists

1096..1200
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1596_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1314..2162
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037FBD04 rbh
Xylose isomerase {ECO:0000313|EMBL:KKB11566.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
xylose isomerase domain-containing protein
scnpilot_cont_500_p_scaffold_1596_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2188..3075)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037DE175 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB85124.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
sugar phosphate isomerase/epimerase
scnpilot_cont_500_p_scaffold_1596_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3196..4683
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037C9D6C rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB78319.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Pyranose oxidase
scnpilot_cont_500_p_scaffold_1596_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4964..5863)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037BD1BF rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL32185.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ATPase
scnpilot_cont_500_p_scaffold_1596_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5878..6882)
DNA (1005bp) protein (335aa)
sugar isomerase (SIS); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=7720049 bin=CNBR_ACT species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFL32184.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar isomerase (SIS)
scnpilot_cont_500_p_scaffold_1596_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7009..7776)
DNA (768bp) protein (256aa)
GntR family transcriptional regulator {ECO:0000313|EMBL:KFL32183.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ribo
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator id=7720047 bin=CNBR_ACT species=Streptomyces sp. SPB74 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1596_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7776..8813)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000368BEFC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL32182.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_1596_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..10258
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036807C9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL32181.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-Acetyl-D-glucosamine ABC transport system sugar-binding protein
scnpilot_cont_500_p_scaffold_1596_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10349..11236
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003664BBB rbh
ABC transporter permease {ECO:0000313|EMBL:KFL32180.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
N-Acetyl-D-glucosamine ABC transport system
scnpilot_cont_500_p_scaffold_1596_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11249..12133
DNA (885bp) protein (295aa)
hypothetical protein, partial n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00035FFCA4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL32179.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_1596_13
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12176..13183
DNA (1008bp) protein (336aa)
Alpha-glucoside transport ATP-binding protein AglK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC3_PELHB
alpha-glucoside transport ATP-binding protein AglK
Alpha-glucoside transport ATP-binding protein AglK {ECO:0000313|EMBL:AEQ50482.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.
scnpilot_cont_500_p_scaffold_1596_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13313..14602)
DNA (1290bp) protein (430aa)
hypothetical protein, partial n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036A3377 rbh
ROK family protein {ECO:0000313|EMBL:CDX59833.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifariu
transcriptional regulator/sugar kinase
scnpilot_cont_500_p_scaffold_1596_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15167..16177
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003685B20 rbh
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM35328.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inqu
spermidine/putrescine ABC transporter ATPase
scnpilot_cont_500_p_scaffold_1596_16
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16191..17063
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037C0002 rbh
ABC transporter permease {ECO:0000313|EMBL:KES23519.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
polyamine ABC transporter permease
scnpilot_cont_500_p_scaffold_1596_17
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17060..17821
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000361C9BF rbh
ABC transporter permease {ECO:0000313|EMBL:KJE35704.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospir
binding-protein-dependent transport system inner membrane protein
Displaying 17 items

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