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scnpilot_cont_500_p_scaffold_1606

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1606_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..388)
DNA (387bp) protein (129aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D44_RHOPB
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABD85692.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_1606_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(385..1536)
DNA (1152bp) protein (384aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D43_RHOPB rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABD85693.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudo
scnpilot_cont_500_p_scaffold_1606_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1629..2402)
DNA (774bp) protein (258aa)
HpcH/HpaI aldolase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D42_RHOPB rbh
HpcH/HpaI aldolase rbh
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABD85694.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palu
scnpilot_cont_500_p_scaffold_1606_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2418..3323)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D41_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD85695.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_1606_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..4317)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D40_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD85696.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_1606_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4539..5342
DNA (804bp) protein (268aa)
Transcriptional regulator, IclR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D39_RHOPB rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABD85697.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="R
scnpilot_cont_500_p_scaffold_1606_7
Pseudomonas sp. GM80, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5738..8149)
DNA (2412bp) protein (804aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Pseudomonas sp. GM80 RepID=J3DW88_9PSED rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:EJN34394.1}; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
Molybdopterin oxidoreductase
scnpilot_cont_500_p_scaffold_1606_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8259..9035)
DNA (777bp) protein (259aa)
Regulatory protein GntR HTH n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKN3_XANP2
regulatory protein GntR HTH
Regulatory protein GntR HTH {ECO:0000313|EMBL:ABS68576.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter auto
scnpilot_cont_500_p_scaffold_1606_9
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9205..9858
DNA (654bp) protein (218aa)
Putative zinc-binding alcohol dehydrogenase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKL7_NEPCE
Putative zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:EAR61080.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibac
quinone oxidoreductase
scnpilot_cont_500_p_scaffold_1606_10
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9827..10096
DNA (270bp) protein (90aa)
Putative quinone oxidoreductase YhdH n=1 Tax=Vibrio cholerae HE48 RepID=F9AVD4_VIBCL
Quinone oxidoreductase {ECO:0000313|EMBL:KDM92051.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotoler
quinone oxidoreductase
scnpilot_cont_500_p_scaffold_1606_11
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10136..11191
DNA (1056bp) protein (352aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YR31_9RHIZ
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIU28821.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pand
scnpilot_cont_500_p_scaffold_1606_12
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11216..12046
DNA (831bp) protein (277aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6E949_SINMK
ABC transporter
ABC transporter permease {ECO:0000313|EMBL:KDP71651.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="
scnpilot_cont_500_p_scaffold_1606_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12051..12821
DNA (771bp) protein (257aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036993E3
ABC-type spermidine/putrescine transport system, permease component II
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:CDN58338.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizo
scnpilot_cont_500_p_scaffold_1606_14
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12818..14929
DNA (2112bp) protein (704aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V7Q3_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EGW43559.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp.
CoA-binding domain-containing protein
scnpilot_cont_500_p_scaffold_1606_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14947..15771
DNA (825bp) protein (275aa)
echA; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodococcus opacus M213 RepID=K8X9Y2_RHOOP
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EKT77626.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
scnpilot_cont_500_p_scaffold_1606_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15768..16841
DNA (1074bp) protein (358aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloba
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YR34_9RHIZ
polyamine-transporting ATPase
scnpilot_cont_500_p_scaffold_1606_17
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17129..17863)
DNA (735bp) protein (245aa)
Two-component system, sensor histidine kinase RegB n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJ35_9BRAD
Two-component system, sensor histidine kinase RegB {ECO:0000313|EMBL:ERF84466.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
CysZ-like protein
scnpilot_cont_500_p_scaffold_1606_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17913..18707)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P604_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33853.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
lipo-like protein
scnpilot_cont_500_p_scaffold_1606_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18875..20350
DNA (1476bp) protein (492aa)
amine oxidase n=1 Tax=Afipia birgiae RepID=UPI0002DA156D
Uncharacterized protein {ECO:0000313|EMBL:EKS34739.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
amine oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_1606_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20347..21015
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS24_NITHX
ATP-binding domain-containing protein {ECO:0000313|EMBL:KJC61851.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
hypothetical protein
scnpilot_cont_500_p_scaffold_1606_21
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21022..23430)
DNA (2409bp) protein (803aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DIT1_BRAJP
phenylalanyl-tRNA synthetase subunit beta
scnpilot_cont_500_p_scaffold_1606_22
unknown

Not on your lists

comp(23427..23903)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1606_23
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23900..24982)
DNA (1083bp) protein (361aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z0J9_9BRAD
phenylalanyl-tRNA synthetase subunit alpha
scnpilot_cont_500_p_scaffold_1606_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24987..25487)
DNA (501bp) protein (167aa)
DinB family protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQH1_METTR
DinB family protein {ECO:0000313|EMBL:ENY80308.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. M
DinB family protein
scnpilot_cont_500_p_scaffold_1606_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25534..25893)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUQ1_9BRAD
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrh
rplT; 50S ribosomal protein L20
scnpilot_cont_500_p_scaffold_1606_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25957..26157)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJ02_9RHOB
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
rpmI; 50S ribosomal protein L35
scnpilot_cont_500_p_scaffold_1606_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26398..26796
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAD1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10041.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_1606_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26873..27271)
DNA (399bp) protein (133aa)
Translation initiation factor IF-3 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS82_9BRAD
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
infC; translation initiation factor IF-3
scnpilot_cont_500_p_scaffold_1606_29
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27605..28867)
DNA (1263bp) protein (421aa)
Glycosyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PVD4_9RHOB rbh
Glycosyltransferase {ECO:0000313|EMBL:EJW13557.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
glycosyltransferase
scnpilot_cont_500_p_scaffold_1606_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29007..30227)
DNA (1221bp) protein (407aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UP33_METS4
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:KFC74187.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 31 in total

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