ggKbase home page

scnpilot_cont_500_p_scaffold_1717

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1717_1
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..279
DNA (279bp) protein (93aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZT7_9PROT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EHM01335.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetoba
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_1717_2
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285..920
DNA (636bp) protein (212aa)
Transcriptional regulator, MarR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXT4_BORPD
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:KHS13893.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia ce
scnpilot_cont_500_p_scaffold_1717_3
unknown

Not on your lists

1025..1387
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1717_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1339..1683
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ID12_METNO
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KGM30343.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus
hypothetical protein
scnpilot_cont_500_p_scaffold_1717_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1677..3038)
DNA (1362bp) protein (454aa)
4-hydroxybenzoate decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW63_RHITR rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:KJC56900.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
4-hydroxybenzoate decarboxylase
scnpilot_cont_500_p_scaffold_1717_6
bacterium YEK0313, Bacteria

Not on your lists

comp(3055..4701)
DNA (1647bp) protein (549aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003492774 rbh
scnpilot_cont_500_p_scaffold_1717_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4712..5800)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VP33_RHILT
Uncharacterized protein {ECO:0000313|EMBL:KFC70100.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1717_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5812..7071)
DNA (1260bp) protein (420aa)
allantoate amidohydrolase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003451B9E rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC56899.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
amaB; N-carbamoyl-beta-alanine amidohydrolase protein
scnpilot_cont_500_p_scaffold_1717_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7071..8456)
DNA (1386bp) protein (462aa)
Allantoinase {ECO:0000313|EMBL:AHK05027.1}; EC=3.5.2.5 {ECO:0000313|EMBL:AHK05027.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
Amidohydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F97_MESSB rbh
allB; allantoinase rbh
scnpilot_cont_500_p_scaffold_1717_10
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(8466..9176)
DNA (711bp) protein (237aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B3D7D6
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAI80404.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" s
scnpilot_cont_500_p_scaffold_1717_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9163..9927)
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003480EBD rbh
livG; branched-chain amino acid transport system ATP-binding protein
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AHK05035.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
scnpilot_cont_500_p_scaffold_1717_12
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(9924..10772)
DNA (849bp) protein (283aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6E22D rbh
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter, permease {ECO:0000313|EMBL:BAI80402.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Defe
scnpilot_cont_500_p_scaffold_1717_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10769..11650)
DNA (882bp) protein (294aa)
amino acid ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003467807 rbh
amino acid ABC transporter permease
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:AHK05037.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi
scnpilot_cont_500_p_scaffold_1717_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12880)
DNA (1182bp) protein (394aa)
high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein (EC:3.4.22.34)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B3DDAA rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EDP64131.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacteriu
scnpilot_cont_500_p_scaffold_1717_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13063..14886
DNA (1824bp) protein (608aa)
LysR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z665_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KJC56905.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1717_16
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14900..16063)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF01_XANP2 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS66594.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthob
scnpilot_cont_500_p_scaffold_1717_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16156..16965)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG46_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41612.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter
Displaying 17 items

View Taxonomy