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scnpilot_cont_500_p_scaffold_1901

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1901_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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43..894
DNA (852bp) protein (284aa)
NmrA family protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULZ5_CELFN
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADG76101.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / D
scnpilot_cont_500_p_scaffold_1901_2
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(824..1435)
DNA (612bp) protein (204aa)
hypothetical protein, partial n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00036E9065
Uncharacterized protein {ECO:0000313|EMBL:EMY36253.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1901_3
unknown

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comp(1576..1731)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1901_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2298..3653)
DNA (1356bp) protein (452aa)
ABC transporter related protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ67_CELFA
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:AEE47183.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
scnpilot_cont_500_p_scaffold_1901_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3821..4681)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=N9VSG6_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENY74488.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_cont_500_p_scaffold_1901_6
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4908..6713
DNA (1806bp) protein (602aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAP8_MICTS
ABC transporter ATPase {ECO:0000313|EMBL:KGM13957.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 169
ATPase components of ABC transporters with duplicated ATPase domains
scnpilot_cont_500_p_scaffold_1901_7
unknown

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7037..7435
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1901_8

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7411..8571
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00037EE058 rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI02536.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_cont_500_p_scaffold_1901_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8936..9076)
DNA (141bp) protein (47aa)
Transposase mutator type n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE56_CELFN
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ADG76532.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 48
scnpilot_cont_500_p_scaffold_1901_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9350..10114)
DNA (765bp) protein (255aa)
NLP/P60 protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZF7_CELFA
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEE44878.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113
scnpilot_cont_500_p_scaffold_1901_11
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(11472..12575)
DNA (1104bp) protein (368aa)
PfkB domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL11_CELFN
PfkB domain-containing protein
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_1901_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12633..13265)
DNA (633bp) protein (211aa)
Ketohydroxyglutarate aldolase {ECO:0000313|EMBL:KGM01870.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KGM01870.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KGM01870.1};; TaxID=1408250 species="Bacteria; Actinobacteria; Mi
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UL12_CELFN
2-dehydro-3-deoxyphosphogluconate aldolase
scnpilot_cont_500_p_scaffold_1901_13
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13317..14516)
DNA (1200bp) protein (400aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ACL38382.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ACL38382.1};; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" so
Alpha-N-arabinofuranosidase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H9Z8_ARTCA
scnpilot_cont_500_p_scaffold_1901_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14607..15812)
DNA (1206bp) protein (402aa)
ricin B lectin n=1 Tax=Ruania albidiflava RepID=UPI0003B7A312
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADP78536.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain E
Displaying 14 items

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