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scnpilot_cont_500_p_scaffold_1934

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1934_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46..3231)
DNA (3186bp) protein (1062aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLW7_9RHOB rbh
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:EJW13643.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
scnpilot_cont_500_p_scaffold_1934_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3298..4482)
DNA (1185bp) protein (395aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJ99_9RHOB rbh
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EJW13644.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovul
RND family efflux transporter MFP subunit
scnpilot_cont_500_p_scaffold_1934_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4654..6219)
DNA (1566bp) protein (522aa)
Putative peptidoglycan lipid II flippase MurJ n=1 Tax=Rhodovulum sp. PH10 RepID=J6JG74_9RHOB rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
mviN; virulence factor MviN
scnpilot_cont_500_p_scaffold_1934_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6430..7878
DNA (1449bp) protein (483aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Rhodovulum sp. PH10 RepID=J5PHD9_9RHOB rbh
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:EJW10692.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sour
scnpilot_cont_500_p_scaffold_1934_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7882..9036)
DNA (1155bp) protein (385aa)
aminotransferase DegT n=1 Tax=Afipia birgiae RepID=UPI00031CD3BF
DegT/DnrJ/EryC1/StrS aminotransferase
Uncharacterized protein {ECO:0000313|EMBL:EKS36365.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
scnpilot_cont_500_p_scaffold_1934_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9076..10044)
DNA (969bp) protein (323aa)
Oxidoreductase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219E0_RHOPB
oxidoreductase-like protein
Oxidoreductase-like {ECO:0000313|EMBL:ABD86996.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
scnpilot_cont_500_p_scaffold_1934_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10339..11328
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQG8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06582.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_cont_500_p_scaffold_1934_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11294..12310)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDF8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36368.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
NAD-dependent epimerase/dehydratase
scnpilot_cont_500_p_scaffold_1934_9
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12307..13605)
DNA (1299bp) protein (433aa)
Putative UDP-glucose/GDP-mannose dehydrogenase family protein Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCD99856.1}; EC=1.1.1.132 {ECO:0000313|EMBL:CCD99856.1};; EC=1.1.1.22 {ECO:
UDP-glucose/GDP-mannose dehydrogenase family protein (EC:1.1.1.132 1.1.1.22)
Putative UDP-glucose/GDP-mannose dehydrogenase family protein Capsular polysaccharide biosynthesis protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T079_9BRAD rbh
scnpilot_cont_500_p_scaffold_1934_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13621..15567)
DNA (1947bp) protein (649aa)
Asparagine synthetase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P7J3_9BRAD rbh
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EKS35615.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
asparagine synthase
scnpilot_cont_500_p_scaffold_1934_11
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15621..16337)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039F1345
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADE13111.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans l
scnpilot_cont_500_p_scaffold_1934_12
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16340..17083)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000363FDB1
glycosyl transferase, family 2 Tax=RBG_16_Elusimicrobia_66_12_curated
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_1934_13
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17080..18105)
DNA (1026bp) protein (342aa)
hypothetical protein n=3 Tax=Bacteria RepID=UPI0003622C24
Uncharacterized protein {ECO:0000313|EMBL:KEA44083.1}; TaxID=91352 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobact
scnpilot_cont_500_p_scaffold_1934_14
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(18114..19112)
DNA (999bp) protein (333aa)
hypothetical protein n=2 Tax=Bacteria RepID=UPI0003782325
DegT/DnrJ/EryC1/StrS aminotransferase Tax=CG_Elusi_04
spsC; Spore coat polysaccharide biosynthesis protein spsC
scnpilot_cont_500_p_scaffold_1934_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(19139..19732)
DNA (594bp) protein (198aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase id=2203593 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
acetyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
acetyltransferase
scnpilot_cont_500_p_scaffold_1934_16
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19729..20787)
DNA (1059bp) protein (353aa)
Putative dehydrogenase n=1 Tax=Idiomarina sp. A28L RepID=F7RZW9_9GAMM rbh
lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
oxidoreductase
scnpilot_cont_500_p_scaffold_1934_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20781..21437)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GLY4_METAL
acetyltransferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
acetyltransferase
scnpilot_cont_500_p_scaffold_1934_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21430..22647)
DNA (1218bp) protein (406aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC:2.6.1.87)
aminotransferase DegT n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B49853 rbh
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
scnpilot_cont_500_p_scaffold_1934_19
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22644..23591)
DNA (948bp) protein (316aa)
Glycosyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB61_MAGSA
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAE48914.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillu
scnpilot_cont_500_p_scaffold_1934_20
bacterium UASB270, Bacteria

Not on your lists

comp(23591..24556)
DNA (966bp) protein (322aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:GAK60660.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
dTDP-D-glucose 4,6-dehydratase id=3959739 bin=GWA2_Ignavibacteria-rel_35_8 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
NAD-dependent epimerase/dehydratase
scnpilot_cont_500_p_scaffold_1934_21
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24771..25016
DNA (246bp) protein (82aa)
Putative aminotransferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CZW7_9RHIZ
Putative pyridoxal phosphate-dependent enzyme {ECO:0000313|EMBL:EDQ34864.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Ho
aminotransferase
Displaying 21 items

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