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scnpilot_cont_500_p_scaffold_5065

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_5065_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1126
DNA (1125bp) protein (375aa)
FeS assembly protein SufD n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBF2_XANP2 rbh
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ABS65345.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotr
scnpilot_cont_500_p_scaffold_5065_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1126..2367
DNA (1242bp) protein (414aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1429916 species="Bacteria; Proteo
Cysteine desulfurase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GAQ5_9BRAD
cysteine desulfurase
scnpilot_cont_500_p_scaffold_5065_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2415..2825
DNA (411bp) protein (137aa)
PaaD-like protein (DUF59) involved in Fe-S cluster assembly n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCX7_9RHOB
PaaD-like protein (DUF59) involved in Fe-S cluster assembly {ECO:0000313|EMBL:EJW11226.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhod
FeS assembly SUF system protein
scnpilot_cont_500_p_scaffold_5065_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2939..3322
DNA (384bp) protein (128aa)
FeS assembly scaffold SufA n=1 Tax=Afipia felis ATCC 53690 RepID=K8NCV7_AFIFE
FeS assembly scaffold SufA {ECO:0000313|EMBL:EKS28437.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690
iscA; iron-sulfur cluster assembly accessory protein
scnpilot_cont_500_p_scaffold_5065_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3344..4417)
DNA (1074bp) protein (358aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAW3_9BRAD
Diguanylate cyclase {ECO:0000313|EMBL:ETR75013.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
diguanylate cyclase
scnpilot_cont_500_p_scaffold_5065_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4586..5857)
DNA (1272bp) protein (424aa)
cshA; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.1.-)
DEAD-box ATP-dependent RNA helicase CshA n=2 Tax=Oligotropha carboxidovorans RepID=B6JHF5_OLICO
DEAD/DEAH box helicase {ECO:0000313|EMBL:ETR75014.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
scnpilot_cont_500_p_scaffold_5065_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6099..6584
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DX52_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW09674.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
putative protein-S-isoprenylcysteine methyltransferase
scnpilot_cont_500_p_scaffold_5065_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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6656..7822
DNA (1167bp) protein (389aa)
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVQ2_RUBXD
scnpilot_cont_500_p_scaffold_5065_9
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7880..8584)
DNA (705bp) protein (235aa)
Putative class II aldolase n=1 Tax=Burkholderia sp. RPE64 RepID=R4WRW5_9BURK
putative class II aldolase
Putative class II aldolase {ECO:0000313|EMBL:BAN27299.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp
scnpilot_cont_500_p_scaffold_5065_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8692..9675
DNA (984bp) protein (328aa)
MFS transporter n=1 Tax=Rhizobium giardinii RepID=UPI0003814083
MFS transporter {ECO:0000313|EMBL:KJB96610.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KA
bug; ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_5065_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..10767
DNA (999bp) protein (333aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JBW8_9BURK
putative Bug-like extra cytoplasmic solute receptor, TTT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_5065_12
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10913..12217)
DNA (1305bp) protein (435aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MF1_RHOP5
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:KIF65932.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
Displaying 12 items

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