ggKbase home page

scnpilot_cont_500_p_scaffold_5156

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_5156_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1121)
DNA (1119bp) protein (373aa)
transporter n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377326
Transporter {ECO:0000313|EMBL:KIO48647.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CagE, TrbE, VirB component of type IV transporter system
scnpilot_cont_500_p_scaffold_5156_2
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1424..1759)
DNA (336bp) protein (112aa)
Conjugal transfer protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PBT4_XYLFA
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AAF84855.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (
scnpilot_cont_500_p_scaffold_5156_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1760..2728)
DNA (969bp) protein (323aa)
Type II secretion system protein E n=1 Tax=Ralstonia solanacearum SD54 RepID=V5CHM1_RALSL
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KIO48650.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
Conjugal transfer protein trbB
scnpilot_cont_500_p_scaffold_5156_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2825..3076)
DNA (252bp) protein (84aa)
Putative transcriptional regulator n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BHR2_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KIO48706.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_5156_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3455..4081
DNA (627bp) protein (209aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X742_THIK1 rbh
Partition protein {ECO:0000313|EMBL:KIO48651.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;
Cobyrinic acid ac-diamide synthase rbh
scnpilot_cont_500_p_scaffold_5156_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4078..4401
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X743_THIK1
Uncharacterized protein {ECO:0000313|EMBL:KIO48652.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_5156_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4560..4880
DNA (321bp) protein (107aa)
partition protein C n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037B766B
Partition protein C {ECO:0000313|EMBL:KIO48653.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
hypothetical protein
scnpilot_cont_500_p_scaffold_5156_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5083..6270
DNA (1188bp) protein (396aa)
Plasmid replicase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X745_THIK1 rbh
plasmid replicase
Plasmid replicase {ECO:0000313|EMBL:ADG32554.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillu
scnpilot_cont_500_p_scaffold_5156_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6402..6740
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X746_THIK1
Uncharacterized protein {ECO:0000313|EMBL:KIO48655.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_5156_10
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6916..7437
DNA (522bp) protein (174aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T0Y1B6_9ZZZZ
IS4 family transposase Tax=RBG_16_Gallionellales_57_15_curated
IS4 family transposase
Displaying 10 items

View Taxonomy