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scnpilot_cont_500_p_scaffold_6364

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_6364_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..277)
DNA (276bp) protein (92aa)
amidase n=1 Tax=Dyella japonica RepID=UPI0002F67152
amidase
Amidase {ECO:0000313|EMBL:AIF48286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_cont_500_p_scaffold_6364_2
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(274..621)
DNA (348bp) protein (116aa)
Pirin family protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5ADB4_BURGB
pirin family protein
Pirin family protein {ECO:0000313|EMBL:AJK45541.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae P
scnpilot_cont_500_p_scaffold_6364_3
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(585..1088)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R4D9_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ69171.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
scnpilot_cont_500_p_scaffold_6364_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1205..2107
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EC445 rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB53965.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_6364_5
unknown

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2185..2538
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_6364_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2595..3536)
DNA (942bp) protein (314aa)
UPI0003CEE5DE related cluster n=1 Tax=unknown RepID=UPI0003CEE5DE rbh
Transposase {ECO:0000313|EMBL:ESY70601.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.
transposase for insertion sequence NGRIS-19a
scnpilot_cont_500_p_scaffold_6364_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3931..5247)
DNA (1317bp) protein (439aa)
Ammonium transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS12_NITHX
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ammonium transporter
scnpilot_cont_500_p_scaffold_6364_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5338..5676)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q476L0_CUPPJ
glnB; Nitrogen regulatory protein P-II Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
nitrogen regulatory protein P-II
scnpilot_cont_500_p_scaffold_6364_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6544)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000372BB93
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
amtB; Ammonium transporter
Displaying 9 items

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