ggKbase home page

scnpilot_cont_500_p_scaffold_2015

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2015_1
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3..479)
DNA (477bp) protein (159aa)
crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036B81EF
crotonobetainyl-CoA:carnitine CoA-transferase
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_2
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(476..970)
DNA (495bp) protein (165aa)
crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036B81EF
crotonobetainyl-CoA:carnitine CoA-transferase
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_3
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(988..2124)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000360252D rbh
crotonobetainyl-CoA:carnitine CoA-transferase
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_4
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2139..3128)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003650C93 rbh
acetyl esterase
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_5
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3140..4465)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003691473 rbh
major facilitator superfamily protein
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_6
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

4780..6216
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035F979A rbh
LuxR family transcriptional regulator
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_2015_7
unknown

Not on your lists

comp(6243..6848)
DNA (606bp) protein (202aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2015_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6959..7348)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003810E39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ25324.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_2015_9
unknown

Not on your lists

comp(7385..7528)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2015_10
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7860..11594
DNA (3735bp) protein (1245aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000375D4B2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM15092.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans
putative WD-40 repeat protein
scnpilot_cont_500_p_scaffold_2015_11
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11698..11985
DNA (288bp) protein (96aa)
Putative transcriptional regulator, CopG family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AB10_THEID
Uncharacterized protein {ECO:0000313|EMBL:KGM17953.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM
putative transcriptional regulator, CopG family
scnpilot_cont_500_p_scaffold_2015_12
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12088..13986
DNA (1899bp) protein (633aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H5X9_CELFA rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEE46709.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas f
acyl-CoA dehydrogenase domain-containing protein
scnpilot_cont_500_p_scaffold_2015_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14097..14507
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTF2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22632.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
scnpilot_cont_500_p_scaffold_2015_14
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14799..15734)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZ88_CELFA
Uncharacterized protein {ECO:0000313|EMBL:ADG73749.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482
hypothetical protein
Displaying 14 items

View Taxonomy