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scnpilot_cont_500_p_scaffold_2120

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2120_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..763
DNA (762bp) protein (254aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF04_XANP2 rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABS66597.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;"
scnpilot_cont_500_p_scaffold_2120_2
unknown

Not on your lists

871..1737
DNA (867bp) protein (289aa)
Bifunctional protein FolD n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4W3_9RHOO rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobiu
methenyltetrahydrofolate cyclohydrolase
scnpilot_cont_500_p_scaffold_2120_3
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1734..2462)
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase n=2 Tax=Alcaligenes RepID=M5IX37_9BURK rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ERI32944.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
scnpilot_cont_500_p_scaffold_2120_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2459..3241)
DNA (783bp) protein (261aa)
DNA replication and repair protein RecF n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJV9_9BRAD rbh
DNA replication and repair protein RecF {ECO:0000313|EMBL:ERF84741.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
hypothetical protein
scnpilot_cont_500_p_scaffold_2120_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3250..4491)
DNA (1242bp) protein (414aa)
Putative short chain dehydrogenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EGR7_BRASB rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC42158.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
short chain dehydrogenase
scnpilot_cont_500_p_scaffold_2120_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4491..5660)
DNA (1170bp) protein (390aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2T045_9RHIZ
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGD87356.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
Thiolase
scnpilot_cont_500_p_scaffold_2120_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5657..7300)
DNA (1644bp) protein (548aa)
UPI0003D60BBC related cluster n=1 Tax=unknown RepID=UPI0003D60BBC rbh
Long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AHC45452.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromob
scnpilot_cont_500_p_scaffold_2120_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7306..7788)
DNA (483bp) protein (161aa)
Ring hydroxylating subunit beta family protein 3 n=1 Tax=Achromobacter piechaudii HLE RepID=J4P6I4_9BURK
Phenylpropionate dioxygenase {ECO:0000313|EMBL:KJC42465.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
Small subunit of phenylpropionate dioxygenase
scnpilot_cont_500_p_scaffold_2120_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7799..9112)
DNA (1314bp) protein (438aa)
carBb2; putative dioxygenase hydroxylase large subunit (EC:1.14.12.-)
Putative dioxygenase hydroxylase large component n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6Z5_AZOSB rbh
Oxidoreductase {ECO:0000313|EMBL:KJC42464.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885
scnpilot_cont_500_p_scaffold_2120_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9130..10104)
DNA (975bp) protein (325aa)
Probable vanillate O-demethylase oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6Z4_AZOSB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC57123.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
vanB2; vanillate O-demethylase oxidoreductase
scnpilot_cont_500_p_scaffold_2120_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10627..11775
DNA (1149bp) protein (383aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KVX1_9BURK rbh
extracellular ligand-binding receptor
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL77143.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
scnpilot_cont_500_p_scaffold_2120_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11891..12958
DNA (1068bp) protein (356aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LP0_RHOP5 rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABJ07144.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" s
scnpilot_cont_500_p_scaffold_2120_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12958..14727
DNA (1770bp) protein (590aa)
Branched-chain amino acid transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIV9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC56139.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
branched chain amino acid ABC transporter permease/ATP-binding protein
scnpilot_cont_500_p_scaffold_2120_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14724..14981
DNA (258bp) protein (86aa)
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S1G7_9BURK
Branched-chain amino acid transport ATP-binding protein LivF
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG21468.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
scnpilot_cont_500_p_scaffold_2120_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14957..15247
DNA (291bp) protein (97aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EGR0_BRASB
Metal-dependent hydrolase {ECO:0000313|EMBL:KJC42151.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
high-affinity branched-chain amino acid transport protein, ATP binding protein
scnpilot_cont_500_p_scaffold_2120_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15244..16857
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003710A0B rbh
Crotonobetaine/carnitine-CoA ligase {ECO:0000313|EMBL:KGH15930.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas test
AMP-dependent synthetase and ligase
scnpilot_cont_500_p_scaffold_2120_17

Not on your lists

16873..17964
DNA (1092bp) protein (364aa)
opine dehydrogenase (EC:1.5.1.28)
Putative opine dehydrogenase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQH0_BRASO
Putative opine dehydrogenase {ECO:0000313|EMBL:BAP28540.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_cont_500_p_scaffold_2120_18

Not on your lists

17978..18967
DNA (990bp) protein (330aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CV88_9BRAD
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:BAP28539.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_cont_500_p_scaffold_2120_19

Not on your lists

comp(18970..19740)
DNA (771bp) protein (257aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HA5_BRADU
ABC transporter permease {ECO:0000313|EMBL:BAP28537.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter permease
scnpilot_cont_500_p_scaffold_2120_20

Not on your lists

comp(19737..20519)
DNA (783bp) protein (261aa)
Putative ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S5S0_9BRAD
ABC transporter permease {ECO:0000313|EMBL:BAP28536.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter permease
scnpilot_cont_500_p_scaffold_2120_21
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20516..21289)
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJX8_9BRAD
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EHR04689.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
nitrate ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_2120_22
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21326..22321)
DNA (996bp) protein (332aa)
Bll6093 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HA1_BRADU
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC34368.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2120_23
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22443..24011)
DNA (1569bp) protein (523aa)
sulfatase family protein 3 (EC:3.1.6.-)
Sulfatase family protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPI2_ACHXA rbh
Sulfatase {ECO:0000313|EMBL:KGY28544.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxyd
scnpilot_cont_500_p_scaffold_2120_24
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24028..24996)
DNA (969bp) protein (323aa)
Extra-cytoplasmic solute receptor n=2 Tax=Burkholderiaceae RepID=R7XGK1_9RALS
extra-cytoplasmic solute receptor
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS85141.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
scnpilot_cont_500_p_scaffold_2120_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25166..26095
DNA (930bp) protein (310aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y6C2_9BRAD
Putative transcriptional regulator {ECO:0000313|EMBL:KGJ68177.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
bacterial regulatory helix-turn-helix , lysR family protein
scnpilot_cont_500_p_scaffold_2120_26
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26317..27090)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNQ2_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19190.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
Displaying 26 items

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