ggKbase home page

scnpilot_cont_500_p_scaffold_2157

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2157_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..324)
DNA (324bp) protein (108aa)
3-oxoacyl-(acyl-carrier-protein) reductase protein (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035CC9D9
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDP71308.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
scnpilot_cont_500_p_scaffold_2157_2
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

467..1405
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D96ED rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJZ18046.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
LysR family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_2157_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1478..2257)
DNA (780bp) protein (260aa)
Ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036FB3D3 rbh
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:EHJ97398.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
scnpilot_cont_500_p_scaffold_2157_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2262..3026)
DNA (765bp) protein (255aa)
Siderophore ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVT6_RHITR rbh
siderophore ABC transporter, ATP-binding protein
Siderophore ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74264.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
scnpilot_cont_500_p_scaffold_2157_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3023..4009)
DNA (987bp) protein (329aa)
Siderophore ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSI1_RHITR rbh
siderophore ABC transporter, permease protein
Siderophore ABC transporter, permease protein {ECO:0000313|EMBL:AGB74263.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
scnpilot_cont_500_p_scaffold_2157_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4064..5080)
DNA (1017bp) protein (339aa)
Siderophore ABC transporter, periplasmic substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSQ3_RHITR rbh
siderophore ABC transporter, periplasmic substrate-binding protein
Siderophore ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:AGB74262.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizob
scnpilot_cont_500_p_scaffold_2157_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5581..6675)
DNA (1095bp) protein (365aa)
Diguanylate cyclase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVV8_RHITR rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AGB74260.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
scnpilot_cont_500_p_scaffold_2157_8
unknown

Not on your lists

comp(6895..7599)
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2157_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7769..9142
DNA (1374bp) protein (458aa)
Sulfite reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSH3_RHITR rbh
sulfite reductase
Sulfite reductase {ECO:0000313|EMBL:AGB74258.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
scnpilot_cont_500_p_scaffold_2157_10
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9205..10131
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5S1_AGRVS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM40219.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
scnpilot_cont_500_p_scaffold_2157_11
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10112..11254
DNA (1143bp) protein (381aa)
Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Rhizobium sp. AP16 RepID=J2WAU1_9RHIZ rbh
Cytochrome o ubiquinol oxidase subunit II {ECO:0000313|EMBL:EJK79730.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cyoA; ubiquinol oxidase subunit II rbh
scnpilot_cont_500_p_scaffold_2157_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11284..11880
DNA (597bp) protein (199aa)
Electron transport protein SCO1/SenC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU69_RHITR rbh
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AGB74256.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
scnpilot_cont_500_p_scaffold_2157_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12017..12385
DNA (369bp) protein (123aa)
Copper resistance protein C n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVV3_RHITR
copper resistance protein C
Copper resistance protein C {ECO:0000313|EMBL:AGB74255.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" s
scnpilot_cont_500_p_scaffold_2157_14
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12480..13136)
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B2920
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCM77383.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rh
rmrR; putative TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_2157_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13260..14453
DNA (1194bp) protein (398aa)
hemolysin secretion protein D n=1 Tax=Rhizobium leguminosarum RepID=UPI0003787C27 rbh
secretion protein HlyD family protein rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:ACS60759.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
scnpilot_cont_500_p_scaffold_2157_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14477..14674
DNA (198bp) protein (66aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WDQ5_RHILT
DSBA oxidoreductase
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJC83976.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
scnpilot_cont_500_p_scaffold_2157_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14703..15449
DNA (747bp) protein (249aa)
DSBA oxidoreductase n=1 Tax=Rhizobium RepID=UPI00037B299E
EmrB/QacA subfamily multidrug resistance transporter protein
Multidrug efflux transporter protein {ECO:0000313|EMBL:ABC93053.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
Displaying 17 items

View Taxonomy