ggKbase home page

scnpilot_cont_500_p_scaffold_2162

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2162_1
unknown

Not on your lists

comp(576..1109)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI0003772E7A
scnpilot_cont_500_p_scaffold_2162_2
unknown

Not on your lists

comp(1120..2040)
DNA (921bp) protein (307aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2517..3272)
DNA (756bp) protein (252aa)
DNA ligase D n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA3_PSEUX
DNA ligase D
DNA ligase D {ECO:0000313|EMBL:AEA27127.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 5
scnpilot_cont_500_p_scaffold_2162_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3700..4335)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25331.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2162_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4332..4814)
DNA (483bp) protein (161aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD1_PSEUX
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA26505.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2162_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4811..5164)
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD0_PSEUX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEA26504.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_2162_7
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5246..6457)
DNA (1212bp) protein (404aa)
Transposase n=2 Tax=Mycobacterium RepID=G8RKF6_MYCRN rbh
putative transposase
Putative transposase {ECO:0000313|EMBL:AJC61804.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
scnpilot_cont_500_p_scaffold_2162_8
unknown

Not on your lists

6775..7053
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_9
Streptomyces sp. ML694-90F3, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7041..7793)
DNA (753bp) protein (251aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB90
Uncharacterized protein {ECO:0000313|EMBL:BAP34755.1}; TaxID=1265536 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. ML694-90F3.;"
NUDIX hydrolase
scnpilot_cont_500_p_scaffold_2162_10
unknown

Not on your lists

comp(7904..8386)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8747..9139
DNA (393bp) protein (131aa)
Transcriptional regulator, ArsR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD0_PSEUX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEA26504.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_2162_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9139..9636
DNA (498bp) protein (166aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXD1_PSEUX
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA26505.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2162_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9633..10256
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE1_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA25331.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2162_14
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10489..11562)
DNA (1074bp) protein (358aa)
Putative transposase n=1 Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QMZ4_9MYCO
Putative transposase
Transposase {ECO:0000313|EMBL:CCC45170.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacter
scnpilot_cont_500_p_scaffold_2162_15
Corynebacterium vitaeruminis, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11961..12143
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE164
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI23409.1}; TaxID=1224164 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium vitaeruminis D
scnpilot_cont_500_p_scaffold_2162_16
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12271..13668
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00037846F9
Esterase {ECO:0000313|EMBL:EYT82550.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
putative esterase
scnpilot_cont_500_p_scaffold_2162_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13827..15122
DNA (1296bp) protein (432aa)
Transposase mutator type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L758_PSEUX rbh
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEA29031.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_2162_18
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15607..16929
DNA (1323bp) protein (441aa)
CHAD domain containing protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WPZ2_ACTMD
CHAD domain containing protein
CHAD domain containing protein {ECO:0000313|EMBL:ACU35048.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strai
scnpilot_cont_500_p_scaffold_2162_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16896..17210
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT47_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26265.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2162_20
unknown

Not on your lists

comp(17544..17792)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_21
unknown

Not on your lists

comp(17963..18079)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_22
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18181..18402
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR6_PSEUX
Membrane protein {ECO:0000313|EMBL:CDO10040.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2162_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18462..18704
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24626.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2162_24
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19006..19728)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035D05F4
Uncharacterized protein {ECO:0000313|EMBL:CEL12985.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
endonuclease III-like protein
scnpilot_cont_500_p_scaffold_2162_25
unknown

Not on your lists

19793..20002
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2162_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20060..21076
DNA (1017bp) protein (339aa)
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUC5_PSEUX rbh
F420-dependent oxidoreductase
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:AEA24584.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_2162_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21089..21316
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24618.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2162_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21313..21987
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ9_PSEUX
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AEA24619.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseud
scnpilot_cont_500_p_scaffold_2162_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21998..22996
DNA (999bp) protein (333aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Methylenetetrahydrofolate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR4_PSEUX rbh
methylenetetrahydrofolate reductase
scnpilot_cont_500_p_scaffold_2162_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22993..23754
DNA (762bp) protein (254aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVR5_PSEUX
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA24625.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
Displaying items 1-30 of 31 in total

View Taxonomy