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scnpilot_cont_500_p_scaffold_2499

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2499_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63710.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_cont_500_p_scaffold_2499_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104..427
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLP6_9RHOB
UPF0235 protein A33M_2828 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
hypothetical protein
scnpilot_cont_500_p_scaffold_2499_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

438..1316
DNA (879bp) protein (293aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUI3_9BRAD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensi
scnpilot_cont_500_p_scaffold_2499_4
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1382..1999
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0003195966
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ07210.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
scnpilot_cont_500_p_scaffold_2499_5

Not on your lists

2046..2498
DNA (453bp) protein (151aa)
Putative quinone binding protein n=1 Tax=mine drainage metagenome RepID=E6PI32_9ZZZZ
Putative quinone binding protein {ECO:0000313|EMBL:CBH76122.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
quinone binding protein
scnpilot_cont_500_p_scaffold_2499_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2693..3202)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P065_9BRAD
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ETR77919.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
N-acetyltransferase GCN5
scnpilot_cont_500_p_scaffold_2499_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3368..5203)
DNA (1836bp) protein (612aa)
small GTP-binding protein (EC:2.7.7.4)
GTP-binding protein TypA/BipA n=1 Tax=Rhodovulum sp. PH10 RepID=J6LHN4_9RHOB rbh
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EJW12418.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
scnpilot_cont_500_p_scaffold_2499_8
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5537..5830
DNA (294bp) protein (98aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1H3_9PROT
scnpilot_cont_500_p_scaffold_2499_9
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6051..6458
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E8P8_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32542.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_2499_10
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6676..7689
DNA (1014bp) protein (338aa)
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Thauera sp. 63 RepID=N6XJZ5_9RHOO
C4-dicarboxylate-binding periplasmic protein {ECO:0000313|EMBL:ENO79700.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauer
TRAP dicarboxylate transporter, DctP subunit
scnpilot_cont_500_p_scaffold_2499_11

Not on your lists

7711..8214
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EE59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96809.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tripartite ATP-independent periplasmic transporter DctQ component
scnpilot_cont_500_p_scaffold_2499_12
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8228..9508
DNA (1281bp) protein (427aa)
TRAP-type C4-dicarboxylate transport system, large permease component n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z1X1_9RHOB rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:GAD55340.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
TRAP dicarboxylate transporter, DctM subunit
scnpilot_cont_500_p_scaffold_2499_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9536..10510)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGX6_BRAJP
NADPH:quinone oxidoreductase
Quinone oxidoreductase {ECO:0000313|EMBL:AHY55801.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japo
scnpilot_cont_500_p_scaffold_2499_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11399
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BG90_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI04952.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_cont_500_p_scaffold_2499_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11465..12694
DNA (1230bp) protein (410aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
50S rRNA methyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B672FD
pyruvate formate lyase activating enzyme 2 (yfgB)
scnpilot_cont_500_p_scaffold_2499_16
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12708..13160
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNT3_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86275.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
Displaying 16 items

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