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scnpilot_cont_500_p_scaffold_273

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_273_31
Sphingomonas sp. A1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33551..34000
DNA (450bp) protein (150aa)
TrbN n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC42_9SPHN
transglycosylase SLT domain-containing protein 6
TrbN {ECO:0000313|EMBL:BAE19741.1}; TaxID=90322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A1.;"
scnpilot_cont_500_p_scaffold_273_32
unknown

Not on your lists

34054..34260
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_273_33
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34841..35449)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B3A974
Uncharacterized protein {ECO:0000313|EMBL:AKF80548.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
von Willebrand factor type D domain-containing protein
scnpilot_cont_500_p_scaffold_273_34
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35541..35684
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036E03A3
Plasmid stabilization system protein {ECO:0000313|EMBL:EDQ35510.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea pho
scnpilot_cont_500_p_scaffold_273_35
unknown

Not on your lists

comp(36010..36864)
DNA (855bp) protein (285aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_273_36
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37193..37462
DNA (270bp) protein (90aa)
Toxin-antitoxin system protein n=6 Tax=Bacteria RepID=H7EGH3_SALHO
CopG/Arc/MetJ family transcriptional regulator
KluA protein {ECO:0000313|EMBL:AJM90452.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xyloso
scnpilot_cont_500_p_scaffold_273_37
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37459..37773
DNA (315bp) protein (105aa)
plasmid stabilization protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023764DD
Plasmid stabilization system protein {ECO:0000313|EMBL:EXI86898.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter
plasmid stabilization system protein
scnpilot_cont_500_p_scaffold_273_38
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

38102..38839
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTS0_SIDLE
hypothetical protein Tax=RBG_13_Planctomycetes_44_8b_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_273_39
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39179..39454
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPI3_SIDLE
DNA-binding protein {ECO:0000313|EMBL:KIO48698.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
histone family protein DNA-binding protein
scnpilot_cont_500_p_scaffold_273_40
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39578..40414)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=I6RK56_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDQ09413.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
hypothetical protein
scnpilot_cont_500_p_scaffold_273_41
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40460..41344)
DNA (885bp) protein (295aa)
putative RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B2EF93 rbh
Retron-type reverse transcriptase {ECO:0000313|EMBL:EXI65661.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
scnpilot_cont_500_p_scaffold_273_42
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41385..41690)
DNA (306bp) protein (102aa)
Putative transcriptional regulator (Helix-turn-helix motif, XRE-like) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=D3DXP5_RALME
putative transcriptional regulator (helix-turn-helix motif, XRE-like)
Putative transcriptional regulator (Helix-turn-helix motif, XRE-like) {ECO:0000313|EMBL:ADC45065.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiace
scnpilot_cont_500_p_scaffold_273_43
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41752..41988)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI65659.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
scnpilot_cont_500_p_scaffold_273_44
unknown

Not on your lists

42057..42176
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_273_45
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42486..44405)
DNA (1920bp) protein (640aa)
ParB-like nuclease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFJ3_9PROT
Chromosomal partitioning protein ParB {ECO:0000313|EMBL:KIO48661.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
ParB-like nuclease
scnpilot_cont_500_p_scaffold_273_46
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44474..44806)
DNA (333bp) protein (111aa)
COG0286: Type I restriction-modification system methyltransferase subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFR7_9PROT
WGS project CAUA00000000 data, contig 1 {ECO:0000313|EMBL:CCU61013.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
hypothetical protein
scnpilot_cont_500_p_scaffold_273_47
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45630..45920
DNA (291bp) protein (97aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIZ7_9PROT
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CCU62463.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
PAS sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_cont_500_p_scaffold_273_48
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46072..47088
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFM6_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61174.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_cont_500_p_scaffold_273_49
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47155..48441
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5CAU7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48672.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
BNR/Asp-box repeat-containing protein
scnpilot_cont_500_p_scaffold_273_50
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48743..49207
DNA (465bp) protein (155aa)
Bacterioferritin n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6D6_NITMU
bacterioferritin
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multifor
scnpilot_cont_500_p_scaffold_273_51
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49564..49941
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62703.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_cont_500_p_scaffold_273_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50343..50978)
DNA (636bp) protein (212aa)
RES domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0G8_VARPS
RES domain protein
RES domain protein {ECO:0000313|EMBL:ACS22512.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strai
scnpilot_cont_500_p_scaffold_273_53
unknown

Not on your lists

comp(50975..51802)
DNA (828bp) protein (276aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_273_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52129..53175)
DNA (1047bp) protein (349aa)
Uncharacterized protein {ECO:0000313|EMBL:KEN89350.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
scnpilot_cont_500_p_scaffold_273_55
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53276..54241)
DNA (966bp) protein (322aa)
Integrase family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW76_ACCPU rbh
integrase
Integrase family protein {ECO:0000313|EMBL:ACV37886.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosp
Displaying items 31-55 of 55 in total

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