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scnpilot_cont_500_p_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_273_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..598)
DNA (597bp) protein (199aa)
Vitamin K epoxide reductase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B7B005
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG88854.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
scnpilot_cont_500_p_scaffold_273_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(771..1133)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P9S4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KIO48688.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
putative Co/Zn/Cd efflux system membrane fusion protein
scnpilot_cont_500_p_scaffold_273_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1209..1562)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSZ5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48689.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_273_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1623..4748)
DNA (3126bp) protein (1042aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIM3_9PROT rbh
Cation transporter {ECO:0000313|EMBL:KIO48135.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.
CzcA family heavy metal efflux pump
scnpilot_cont_500_p_scaffold_273_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4750..6369)
DNA (1620bp) protein (540aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ49_9PROT
RND transporter {ECO:0000313|EMBL:KIO48136.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RND family efflux transporter MFP subunit
scnpilot_cont_500_p_scaffold_273_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6366..7742)
DNA (1377bp) protein (459aa)
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIR3_9PROT rbh
Transporter {ECO:0000313|EMBL:KIO48137.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Outer membrane efflux protein
scnpilot_cont_500_p_scaffold_273_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7739..8266)
DNA (528bp) protein (176aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW2_9PROT
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCU62521.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitroso
copper binding periplasmic protein cusF
scnpilot_cont_500_p_scaffold_273_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9078..9680)
DNA (603bp) protein (201aa)
IncP-type DNA transfer maturation peptidase TraF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG8_9PROT
IncP-type DNA transfer maturation peptidase TraF {ECO:0000313|EMBL:CCU63566.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
conjugal transfer peptidase TraF
scnpilot_cont_500_p_scaffold_273_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9710..11581)
DNA (1872bp) protein (624aa)
IncP-type DNA transfer coupling protein TraG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW64_9PROT
IncP-type DNA transfer coupling protein TraG {ECO:0000313|EMBL:CCU63565.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" so
conjugal transfer coupling protein TraG
scnpilot_cont_500_p_scaffold_273_10
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11578..13533)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVW0_ACCPU
Conjugal transfer relaxase TraI {ECO:0000313|EMBL:EXI79996.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. B
conjugal transfer relaxase TraI
scnpilot_cont_500_p_scaffold_273_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13530..13940)
DNA (411bp) protein (137aa)
Protein TraJ (Relaxosome protein) n=1 Tax=Burkholderia pseudomallei Pakistan 9 RepID=C0YE08_BURPE
Protein traJ {ECO:0000313|EMBL:AIO88053.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholder
conjugal transfer relaxosome component TraJ
scnpilot_cont_500_p_scaffold_273_12
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14270..14638
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E10AA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB93644.1}; TaxID=405441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (st
scnpilot_cont_500_p_scaffold_273_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14638..15369
DNA (732bp) protein (244aa)
Protein traL n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T4Q5_META2
Protein traL {ECO:0000313|EMBL:CCE25810.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcali
conjugal transfer protein tral
scnpilot_cont_500_p_scaffold_273_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15366..15881
DNA (516bp) protein (172aa)
conjugal transfer protein TraM n=1 Tax=Methylomicrobium buryatense RepID=UPI000345963A
conjugal transfer protein TraM
Uncharacterized protein {ECO:0000313|EMBL:ACV37766.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_cont_500_p_scaffold_273_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15946..16314)
DNA (369bp) protein (123aa)
Stable inheritance protein n=1 Tax=uncultured bacterium RepID=J9S0H0_9BACT
traO; conjugation protein TraO
KfrB {ECO:0000313|EMBL:AEX00443.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testoster
scnpilot_cont_500_p_scaffold_273_16

Not on your lists

comp(16327..17271)
DNA (945bp) protein (315aa)
plasmid stablization protein ParB n=1 Tax=Xanthomonas axonopodis RepID=UPI0003787016
KorB {ECO:0000313|EMBL:AAY97968.1}; TaxID=1003194 species="other sequences; plasmids.;" source="Plasmid pMCBF1.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_273_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17658..19070)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000371A953 rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
initiator RepB protein
scnpilot_cont_500_p_scaffold_273_18
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19631..20743
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D9D866 rbh
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACC76204.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhol
scnpilot_cont_500_p_scaffold_273_19
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20745..21725
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DC2E76 rbh
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ACC76203.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia p
scnpilot_cont_500_p_scaffold_273_20

Not on your lists

22196..22627
DNA (432bp) protein (144aa)
Conjugative transfer protein n=1 Tax=uncultured bacterium RepID=Q5W3K3_9BACT
Conjugative transfer protein {ECO:0000313|EMBL:AFV47180.1}; TrbA regulator protein {ECO:0000313|EMBL:CAG25998.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;
conjugal transfer protein TrbA
scnpilot_cont_500_p_scaffold_273_21
Sphingomonas sp. A1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22763..23737
DNA (975bp) protein (325aa)
TrbB n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC54_9SPHN
TrbB {ECO:0000313|EMBL:BAE19729.1}; TaxID=90322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A1.;"
trbB; P-type conjugative transfer ATPase TrbB
scnpilot_cont_500_p_scaffold_273_22
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23740..24321
DNA (582bp) protein (194aa)
Conjugal transfer protein TrbC n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0W8U8_9GAMM
conjugative transfer protein TrbC
Conjugative transfer protein TrbC {ECO:0000313|EMBL:AFJ03829.1}; Flags: Precursor;; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophag
scnpilot_cont_500_p_scaffold_273_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24308..24619
DNA (312bp) protein (104aa)
Type IV secretory pathway, VirB3-like family protein n=1 Tax=Pseudomonas putida S610 RepID=V6JCB2_PSEPU
Type IV secretory pathway, VirB3-like family protein {ECO:0000313|EMBL:EST17450.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
trbD; conjugal transfer protein TrbD
scnpilot_cont_500_p_scaffold_273_24
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24616..27210
DNA (2595bp) protein (865aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW41_ACCPU
conjugal transfer protein TrbE
Uncharacterized protein {ECO:0000313|EMBL:ACV37851.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
scnpilot_cont_500_p_scaffold_273_25
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27207..28091
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW40_ACCPU
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EXI84247.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA
conjugal transfer protein TrbF
scnpilot_cont_500_p_scaffold_273_26
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28104..29276
DNA (1173bp) protein (391aa)
TrbG mating pair formation protein n=1 Tax=Burkholderia cepacia RepID=K4IYR8_BURCE
TrbG mating pair formation protein {ECO:0000313|EMBL:AFU76001.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia
trbG; conjugal transfer protein TrbG
scnpilot_cont_500_p_scaffold_273_27
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29270..29860
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW39_ACCPU
conjugal transfer protein TrbH
Uncharacterized protein {ECO:0000313|EMBL:ACV37849.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosph
scnpilot_cont_500_p_scaffold_273_28

Not on your lists

29871..31235
DNA (1365bp) protein (455aa)
Bacterial conjugation TrbI-like protein n=2 Tax=Bacteria RepID=H7EGD9_SALHO
Conjugative transfer protein {ECO:0000313|EMBL:AFV47188.1}; TrbI {ECO:0000313|EMBL:AEV56650.1}; TrbI conjugal transfer protein {ECO:0000313|EMBL:CAG26006.1}; TaxID=77133 species="Bacteria; environment
conjugal transfer protein TrbI
scnpilot_cont_500_p_scaffold_273_29
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31228..32001
DNA (774bp) protein (258aa)
TrbJ n=1 Tax=Bordetella pertussis RepID=Q08KZ3_BORPT
TrbJ {ECO:0000313|EMBL:BAF33465.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
trbJ; conjugal transfer protein TrbJ
scnpilot_cont_500_p_scaffold_273_30

Not on your lists

32216..33538
DNA (1323bp) protein (441aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9R8T0_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR44387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
trbL; P-type conjugative transfer protein TrbL
Displaying items 1-30 of 55 in total

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