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scnpilot_cont_500_p_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_445_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..290)
DNA (288bp) protein (96aa)
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Methionine synthase vitamin-B12 independent n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQG5_PSEUX
vitamin-B12 independent methionine synthase
scnpilot_cont_500_p_scaffold_445_2

Not on your lists

327..1016
DNA (690bp) protein (230aa)
TetR family transcriptional regulator n=2 Tax=uncultured bacterium RepID=C6L162_9BACT
TetR family transcriptional regulator {ECO:0000313|EMBL:BAH90481.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_445_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1093..2976
DNA (1884bp) protein (628aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14627469 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
AMP-dependent synthetase and ligase
scnpilot_cont_500_p_scaffold_445_4
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3017..4171
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKT7_9BRAD rbh
putative ABC transporter, substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
putative ABC transporter, substrate-binding protein
scnpilot_cont_500_p_scaffold_445_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4245..5117
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PPD3_9BRAD rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
branched-chain amino acid ABC transporter permease
scnpilot_cont_500_p_scaffold_445_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5110..6192
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIL8_9BRAD rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
inner-membrane translocator
scnpilot_cont_500_p_scaffold_445_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6189..6980
DNA (792bp) protein (264aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=14627465 bin=bin7_NC10_sister species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
scnpilot_cont_500_p_scaffold_445_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6973..7731
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSN7_9BRAD
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
livG; branched-chain amino acid ABC transporter, ATP-binding protein
scnpilot_cont_500_p_scaffold_445_9
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7713..10076)
DNA (2364bp) protein (788aa)
Probable carbon monoxide dehydrogenase large chain {ECO:0000313|EMBL:EAQ02381.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EAQ02381.1};; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
Probable carbon monoxide dehydrogenase large chain n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0U0_9RHOB rbh
xanthine dehydrogenase, molybdenum binding subunit apoprotein
scnpilot_cont_500_p_scaffold_445_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10073..10555)
DNA (483bp) protein (161aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YD37_9RHIZ
Aldehyde dehydrogenase small subunit {ECO:0000313|EMBL:GAN75864.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Ac
oxidoreductase
scnpilot_cont_500_p_scaffold_445_11
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10548..11429)
DNA (882bp) protein (294aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FXU2_9BURK
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EOA06298.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;"
molybdopterin dehydrogenase FAD-binding
scnpilot_cont_500_p_scaffold_445_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11457..12764)
DNA (1308bp) protein (436aa)
fcbT3; large permease id=14627749 bin=bin7_NC10_sister species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fcbT3; large permease Tax=CSP1_6_Rokubacteria
fcbT3; large permease
scnpilot_cont_500_p_scaffold_445_13
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12761..13303)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000361C820
dctM; small permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease
scnpilot_cont_500_p_scaffold_445_14
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13340..14332)
DNA (993bp) protein (331aa)
TRAP dicarboxylate transporter, DctP subunit, putative n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0S4_9RHOB rbh
TRAP dicarboxylate transporter, DctP subunit, putative {ECO:0000313|EMBL:EAQ02365.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola
TRAP dicarboxylate transporter subunit DctP
scnpilot_cont_500_p_scaffold_445_15
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14760..15158
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346F067
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AJP59703.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
scnpilot_cont_500_p_scaffold_445_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15155..16324
DNA (1170bp) protein (390aa)
mandelate racemase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A5A5C
Mandelate racemase {ECO:0000313|EMBL:KGF80601.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_445_17
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16365..17708
DNA (1344bp) protein (448aa)
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:EFF77414.1}; EC=1.14.12.13 {ECO:0000313|EMBL:EFF77414.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalig
Rieske [2Fe-2S] domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X6Z4_9BURK
terminal oxygenase large subunit
scnpilot_cont_500_p_scaffold_445_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17708..18187
DNA (480bp) protein (160aa)
Putative aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XAI9_VARPD
putative aromatic-ring-hydroxylating dioxygenase, beta subunit
Putative aromatic-ring-hydroxylating dioxygenase, beta subunit {ECO:0000313|EMBL:AGU49344.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
scnpilot_cont_500_p_scaffold_445_19
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18203..18781
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2EMQ3_9PSED
TetR family transcriptional regulator {ECO:0000313|EMBL:EPA92983.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_445_20
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18794..19393)
DNA (600bp) protein (200aa)
Isochorismatase hydrolase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9I0_METS4
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ACA16405.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacte
scnpilot_cont_500_p_scaffold_445_21
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19390..21438)
DNA (2049bp) protein (683aa)
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:EFH11516.1}; EC=3.5.2.9 {ECO:0000313|EMBL:EFH11516.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacterac
Hydantoinase/oxoprolinase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMF0_9PROT rbh
hyuA; N-methylhydantoinase A
scnpilot_cont_500_p_scaffold_445_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21435..23216)
DNA (1782bp) protein (594aa)
N-methylhydantoinase B n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQV1_AZOBR rbh
Hydantoin utilization protein B {ECO:0000313|EMBL:KFG68865.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga a
hyuB; N-methylhydantoinase B rbh
scnpilot_cont_500_p_scaffold_445_23
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23213..24091)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003718604 rbh
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:KJR64229.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;
carboxyvinyl-carboxyphosphonate phosphorylmutase rbh
scnpilot_cont_500_p_scaffold_445_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24093..24818)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH11520.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EFH11520.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; A
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMF4_9PROT rbh
branched chain amino acid ABC transporter ATPase
scnpilot_cont_500_p_scaffold_445_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24811..25572)
DNA (762bp) protein (254aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CRR4_9BRAD rbh
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIB13540.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azos
scnpilot_cont_500_p_scaffold_445_26
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25565..26563)
DNA (999bp) protein (333aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5 rbh
ABC transporter permease {ECO:0000313|EMBL:KFG68870.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata
amino acid ABC transporter permease
scnpilot_cont_500_p_scaffold_445_27
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26560..27432)
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I099_9BRAD rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFG68871.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" s
branched-chain amino acid ABC transporter permease
scnpilot_cont_500_p_scaffold_445_28
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27482..28699)
DNA (1218bp) protein (406aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VYD9_9BRAD rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJN11307.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
putative branched-chain amino-acid ABC transporter, periplasmic component
scnpilot_cont_500_p_scaffold_445_29
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28736..29584)
DNA (849bp) protein (283aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMF9_9PROT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFH11525.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomona
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_445_30
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29709..31133
DNA (1425bp) protein (475aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7C6_AZOC5 rbh
isopropylmalate isomerase large subunit
Displaying items 1-30 of 37 in total

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