ggKbase home page

scnpilot_cont_500_p_scaffold_749

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_749_1
unknown

Not on your lists

739..861
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_749_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

861..1544
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QW44_METTR
Uncharacterized protein {ECO:0000313|EMBL:ELT48549.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium
hypothetical protein
scnpilot_cont_500_p_scaffold_749_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1776..3170)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJW9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW61313.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
scnpilot_cont_500_p_scaffold_749_4
unknown

Not on your lists

comp(3174..4916)
DNA (1743bp) protein (581aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_749_5
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4920..5150)
DNA (231bp) protein (77aa)
Transcriptional regulator {ECO:0000313|EMBL:KEO89706.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_cont_500_p_scaffold_749_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5249..5593
DNA (345bp) protein (115aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD41279.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
scnpilot_cont_500_p_scaffold_749_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5604..6023)
DNA (420bp) protein (140aa)
integrase family protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625461
Site-specific integrase/recombinase {ECO:0000313|EMBL:BAR53479.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
Integrase
scnpilot_cont_500_p_scaffold_749_8
unknown

Not on your lists

6387..6575
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_749_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7257..8465
DNA (1209bp) protein (403aa)
N-succinyl-L,L-diaminopimelate aminotransferase alternative n=1 Tax=Rhodovulum sp. PH10 RepID=J6UG84_9RHOB rbh
Aspartate aminotransferase {ECO:0000313|EMBL:KIZ47456.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomona
class I and II aminotransferase
scnpilot_cont_500_p_scaffold_749_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8477..10960
DNA (2484bp) protein (828aa)
DNA translocase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFY8_9BRAD
Cell division protein FtsK {ECO:0000313|EMBL:ETR77806.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
cell division protein FtsK
scnpilot_cont_500_p_scaffold_749_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11069..11914
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8B9_9RHOB
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sourc
outer membrane lipoprotein carrier protein LolA
scnpilot_cont_500_p_scaffold_749_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12046..12861
DNA (816bp) protein (272aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Rhodovulum sp. PH10 RepID=J5PCE9_9RHOB
Exodeoxyribonuclease III {ECO:0000313|EMBL:EJW09752.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH
scnpilot_cont_500_p_scaffold_749_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12865..13341)
DNA (477bp) protein (159aa)
cAMP-dependent protein kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PRB0_9RHOB
cAMP-dependent protein kinase {ECO:0000313|EMBL:EJW12632.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
cyclic nucleotide-binding protein
scnpilot_cont_500_p_scaffold_749_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13352..14038)
DNA (687bp) protein (229aa)
DNA-binding response regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6LIF5_9RHOB rbh
DNA-binding response regulator {ECO:0000313|EMBL:EJW12633.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
two component transcriptional regulator
scnpilot_cont_500_p_scaffold_749_15
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14164..14721
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWI5_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03356.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
scnpilot_cont_500_p_scaffold_749_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14835..16739
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ID53_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80319.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_cont_500_p_scaffold_749_17
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16743..17450)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSA3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37099.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
hypothetical protein
scnpilot_cont_500_p_scaffold_749_18
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17520..18275)
DNA (756bp) protein (252aa)
cAMP-binding protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L2V4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC32139.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
Crp family transcriptional regulator protein
scnpilot_cont_500_p_scaffold_749_19
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18433..18822
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036A8486
Uncharacterized protein {ECO:0000313|EMBL:BAP77643.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT
response regulator receiver protein
scnpilot_cont_500_p_scaffold_749_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18917..19153)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QH93_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF60486.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_749_21
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19395..22034
DNA (2640bp) protein (880aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1187851 species="Bacteria; Proteo
leuS; leucin-tRNA ligase LeuS (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UGV3_9RHOB rbh
scnpilot_cont_500_p_scaffold_749_22
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22021..22605
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6JB01_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW12645.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_749_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22642..23673
DNA (1032bp) protein (344aa)
DNA polymerase III, delta subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVJ7_AFIFE
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EKS30218.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATC
DNA polymerase III, delta subunit
scnpilot_cont_500_p_scaffold_749_24
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23737..24600)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YV49_BRASO
transglycosylase
Uncharacterized protein {ECO:0000313|EMBL:CAL77775.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_749_25
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24715..25593)
DNA (879bp) protein (293aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHR0_9RHOB rbh
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J {ECO:0000313|EMBL:EJW13064.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
parB; chromosome-partitioning protein ParB
scnpilot_cont_500_p_scaffold_749_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25692..26582)
DNA (891bp) protein (297aa)
Chromosome segregation ATPase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13E19_RHOPS
cobyrinic acid a,c-diamide synthase
Chromosome segregation ATPase {ECO:0000313|EMBL:ABE37670.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseud
scnpilot_cont_500_p_scaffold_749_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26579..27265)
DNA (687bp) protein (229aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
gidB; 16S rRNA methyltransferase GidB (EC:2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYW4_9BRAD
scnpilot_cont_500_p_scaffold_749_28
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27262..29133)
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodovulum sp. PH10 RepID=J5PT70_9RHOB rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1187851 species="Bacte
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Displaying 28 items

View Taxonomy