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scnpilot_cont_500_p_scaffold_828

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_828_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_828_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245..1171)
DNA (927bp) protein (309aa)
UPI0003CFEB9B related cluster n=1 Tax=unknown RepID=UPI0003CFEB9B rbh
Beta-lactamase {ECO:0000313|EMBL:ESZ13059.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A
metallo-beta-lactamase superfamily protein
scnpilot_cont_500_p_scaffold_828_3
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1521..2138)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CMF2_9RHOB
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. T
rpsD; 30S ribosomal protein S4
scnpilot_cont_500_p_scaffold_828_4
unknown

Not on your lists

2538..2801
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_828_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2794..3447
DNA (654bp) protein (218aa)
Integral membrane protein TerC n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNV3_RHOPX
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ADU45949.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseu
scnpilot_cont_500_p_scaffold_828_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3407..4270)
DNA (864bp) protein (288aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1187851 species="Bacteria; Prot
Glutamate racemase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAW4_9RHOB rbh
murI; glutamate racemase
scnpilot_cont_500_p_scaffold_828_7
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4392..4796
DNA (405bp) protein (135aa)
Conserved hypothetical exported protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MHZ6_RHIL3
Uncharacterized protein {ECO:0000313|EMBL:KJF66370.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_828_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4825..5388)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V272_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52052.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_828_9
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5400..6704)
DNA (1305bp) protein (435aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase (Adenylosuccinase) (ASL) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRT0_9BRAD
scnpilot_cont_500_p_scaffold_828_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6836..7525)
DNA (690bp) protein (230aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
ribulose-phosphate 3-epimerase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00038263F2
scnpilot_cont_500_p_scaffold_828_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7751..9004
DNA (1254bp) protein (418aa)
D-amino-acid dehydrogenase (EC:1.4.99.1)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:ADH88965.1}; EC=1.4.99.1 {ECO:0000313|EMBL:ADH88965.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteracea
D-amino acid dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI00037B9F54 rbh
scnpilot_cont_500_p_scaffold_828_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8937..9194)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKA5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07216.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_cont_500_p_scaffold_828_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..10325)
DNA (1077bp) protein (359aa)
Peptidase S58, DmpA n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ITS8_RHOP2
peptidase S58, DmpA
Peptidase S58, DmpA {ECO:0000313|EMBL:ABD08382.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
scnpilot_cont_500_p_scaffold_828_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..11125
DNA (732bp) protein (244aa)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAY2_9RHOB rbh
Cytochrome c-type biogenesis protein CcdA {ECO:0000313|EMBL:EJW10518.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="
cytochrome c biogenesis protein, transmembrane region
scnpilot_cont_500_p_scaffold_828_15
unknown

Not on your lists

comp(11132..11509)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_828_16
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11615..12739)
DNA (1125bp) protein (375aa)
ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CF5CA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJZ29006.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_828_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12851..13234)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RGR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67644.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_828_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13234..13953)
DNA (720bp) protein (240aa)
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A170_STAND
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADH89428.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" sourc
scnpilot_cont_500_p_scaffold_828_19
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13950..14780)
DNA (831bp) protein (277aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031A8FDA rbh
Branched-chain amino acid transport ATP-binding protein LivG
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AIQ90424.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methy
scnpilot_cont_500_p_scaffold_828_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..16126)
DNA (1350bp) protein (450aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C PF7_9BRAD">RepID=F7QPF7_9BRAD
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:EGP06928.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source
inner-membrane translocator
scnpilot_cont_500_p_scaffold_828_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16128..17042)
DNA (915bp) protein (305aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V253_9BRAD
LIV-I protein H {ECO:0000313|EMBL:CEG07512.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease ba
livH2; ABC transporter, high-affinity branched-chain amino acid transport system permease protein LivH
scnpilot_cont_500_p_scaffold_828_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17216..17371
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:EFI52032.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_cont_500_p_scaffold_828_23
unknown

Not on your lists

17571..18155
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_828_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18243..18644)
DNA (402bp) protein (134aa)
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:EGP06925.1}; EC=3.1.1.24 {ECO:0000313|EMBL:EGP06925.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
Beta-ketoadipate enol-lactone hydrolase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C PF4_9BRAD">RepID=F7QPF4_9BRAD
gamma-carboxymuconolactone decarboxylase
scnpilot_cont_500_p_scaffold_828_25
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18674..19465)
DNA (792bp) protein (264aa)
3-oxoadipate enol-lactonase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E24DF7
pcaD; B-ketoadipate enol-lactone hydrolase
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43517.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
scnpilot_cont_500_p_scaffold_828_26
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19510..20874)
DNA (1365bp) protein (455aa)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WHT4_9BRAD
Putative 3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:KGJ66135.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase
scnpilot_cont_500_p_scaffold_828_27
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20984..21640
DNA (657bp) protein (219aa)
Putative polysaccharide deacetylase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G381_9BRAD
putative polysaccharide deacetylase
Putative polysaccharide deacetylase {ECO:0000313|EMBL:BAL75218.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
scnpilot_cont_500_p_scaffold_828_28
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21646..22092
DNA (447bp) protein (149aa)
carbon monoxide dehydrogenase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000382E2EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIG62631.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_828_29
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22170..22538)
DNA (369bp) protein (123aa)
BA14K family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JG37_OLICO
BA14K family protein
BA14K family protein {ECO:0000313|EMBL:EFI51797.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
scnpilot_cont_500_p_scaffold_828_30
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22806..23282
DNA (477bp) protein (159aa)
Carbon monoxide dehydrogenase small subunit n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D288_BRAJP
carbon monoxide dehydrogenase
Carbon monoxide dehydrogenase small subunit {ECO:0000313|EMBL:BAL09343.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sourc
Displaying items 1-30 of 33 in total

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