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scnpilot_cont_500_p_scaffold_885

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_885_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D1Q9_BRAJP
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR77901.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-1
C4-dicarboxylate ABC transporter
scnpilot_cont_500_p_scaffold_885_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..1073)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002F7B26D rbh
Membrane protein {ECO:0000313|EMBL:ETR77900.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
membrane protein
scnpilot_cont_500_p_scaffold_885_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1226..2365)
DNA (1140bp) protein (380aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366A376 rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR77899.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-1
hypothetical protein
scnpilot_cont_500_p_scaffold_885_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2664..4319)
DNA (1656bp) protein (552aa)
L-lactate transport n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTP4_9RHIZ rbh
L-lactate transport {ECO:0000313|EMBL:EJN05278.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="
glycolate permease GlcA
scnpilot_cont_500_p_scaffold_885_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4644..6407
DNA (1764bp) protein (588aa)
ABC transporter-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X83_RHOPB
ABC transporter-like protein
ABC transporter-like {ECO:0000313|EMBL:ABD90253.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pa
scnpilot_cont_500_p_scaffold_885_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6426..6896)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6J3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37116.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
HPP family protein
scnpilot_cont_500_p_scaffold_885_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6967..7926)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ECI2_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ33876.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_cont_500_p_scaffold_885_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8278..8874
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61089.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
scnpilot_cont_500_p_scaffold_885_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8936..10216)
DNA (1281bp) protein (427aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J061_POLGS
glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
scnpilot_cont_500_p_scaffold_885_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10292..10654
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D6E57
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EJW09838.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. P
scnpilot_cont_500_p_scaffold_885_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10669..11883)
DNA (1215bp) protein (405aa)
FAD linked oxidase-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEY1_9RHIZ
FAD linked oxidase-like protein {ECO:0000313|EMBL:EKF20651.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratir
FAD linked oxidase
scnpilot_cont_500_p_scaffold_885_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11887..13380)
DNA (1494bp) protein (498aa)
FAD linked oxidase-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ25_RHOP2
FAD linked oxidase-like protein
FAD linked oxidase-like {ECO:0000313|EMBL:ABD06535.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_cont_500_p_scaffold_885_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..13861
DNA (384bp) protein (128aa)
Cytochrome C n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ82_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49239.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
cytochrome C
scnpilot_cont_500_p_scaffold_885_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13931..14425
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DD7FB0
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:EIM27768.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga
GNAT family acetyltransferase
scnpilot_cont_500_p_scaffold_885_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14429..15091)
DNA (663bp) protein (221aa)
Putative transcriptional regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6UI64_9RHOB
Putative transcriptional regulator {ECO:0000313|EMBL:EJW13264.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovu
putative transcriptional regulator, TetR family
scnpilot_cont_500_p_scaffold_885_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15185..16867)
DNA (1683bp) protein (561aa)
thiamine pyrophosphate protein (EC:2.2.1.6)
thiamine pyrophosphate protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDFEDF rbh
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KFG70142.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Micro
scnpilot_cont_500_p_scaffold_885_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17003..17167)
DNA (165bp) protein (55aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Acidovorax sp. CF316 RepID=J1EB41_9BURK
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
endoribonuclease L-PSP
scnpilot_cont_500_p_scaffold_885_18
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17204..18001)
DNA (798bp) protein (266aa)
Putative aliphatic sulfonates transport permease protein ssuC n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M7_HYPSM rbh
aliphatic sulfonates transport permease ssuC
Putative aliphatic sulfonates transport permease protein ssuC {ECO:0000313|EMBL:CCB63500.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphom
scnpilot_cont_500_p_scaffold_885_19
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18039..18908)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M4_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63497.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp.
scnpilot_cont_500_p_scaffold_885_20
unknown

Not on your lists

comp(18850..19116)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_885_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19135..20547)
DNA (1413bp) protein (471aa)
Amidohydrolase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYJ3_9BURK rbh
Amidohydrolase {ECO:0000313|EMBL:EHP44684.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16
cytosine deaminase
scnpilot_cont_500_p_scaffold_885_22
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20547..21350)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M6_HYPSM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63499.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp.
scnpilot_cont_500_p_scaffold_885_23
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21441..22025
DNA (585bp) protein (195aa)
Transcriptional regulator n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UBU7_9CHRO
Transcriptional regulator {ECO:0000313|EMBL:KDP88382.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp.
transcriptional regulator
scnpilot_cont_500_p_scaffold_885_24
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22026..23840)
DNA (1815bp) protein (605aa)
glucoamylase (EC:3.2.1.3)
Putative glucoamylase or related glycosyl hydrolase protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5W8J8_RALSL rbh
Putative glucoamylase or related glycosyl hydrolase protein {ECO:0000313|EMBL:CCF96119.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralst
scnpilot_cont_500_p_scaffold_885_25
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23837..24880)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AYV6_NOCDD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADH68118.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis das
scnpilot_cont_500_p_scaffold_885_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25021..26190
DNA (1170bp) protein (390aa)
Major facilitator superfamily n=1 Tax=Rhodovulum sp. PH10 RepID=J5PU24_9RHOB rbh
Major facilitator superfamily {ECO:0000313|EMBL:EJW13237.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
major facilitator transporter
scnpilot_cont_500_p_scaffold_885_27
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26289..27407
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE01105.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
twin-arginine translocation pathway signal protein
scnpilot_cont_500_p_scaffold_885_28
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27468..28082)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CAJ6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETR78481.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_885_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28079..29299)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8T3_BRAJP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL07610.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_cont_500_p_scaffold_885_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29390..29704)
DNA (315bp) protein (105aa)
Branched-chain amino acid transport n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFI4_9RHOB
Branched-chain amino acid transport {ECO:0000313|EMBL:EJW12491.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
branched-chain amino acid transport
Displaying items 1-30 of 85 in total

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