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scnpilot_cont_500_p_scaffold_4177

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4177_1
unknown

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1..279
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4177_2
unknown

Not on your lists

276..692
DNA (417bp) protein (139aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4177_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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885..1583
DNA (699bp) protein (233aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2T7_CELGA
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:AEI10654.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cell
scnpilot_cont_500_p_scaffold_4177_4
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1849..2910)
DNA (1062bp) protein (354aa)
Integral membrane protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JRQ5_STREN
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AJC55698.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
scnpilot_cont_500_p_scaffold_4177_5
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3486..4697)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) RepID=H8ISK4_MYCIA rbh
NRAMP family metal ion transporter
Natural resistance-associated macrophage family protein {ECO:0000313|EMBL:EUA28642.1}; TaxID=1299329 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacteriu
scnpilot_cont_500_p_scaffold_4177_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5129..8689
DNA (3561bp) protein (1187aa)
conjugal transfer protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A642 rbh
Multifunctional conjugation protein TraI {ECO:0000313|EMBL:KJL36444.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginse
conjugative relaxase
scnpilot_cont_500_p_scaffold_4177_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8866..9237
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI00037DF35E
Uncharacterized protein {ECO:0000313|EMBL:KJL36445.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sulfate permease
scnpilot_cont_500_p_scaffold_4177_8
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10805..13612)
DNA (2808bp) protein (936aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003662834 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT56667.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_4177_9
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14287..15381)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A88CE rbh
Arabinose metabolism transcriptional repressor {ECO:0000313|EMBL:KJL23077.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
transcriptional regulator
scnpilot_cont_500_p_scaffold_4177_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15589..17535
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L775_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19672.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
scnpilot_cont_500_p_scaffold_4177_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17622..18974
DNA (1353bp) protein (451aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE09_MICTS
sugar ABC transporter periplasmic protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:BAJ75054.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microb
scnpilot_cont_500_p_scaffold_4177_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19103..20068
DNA (966bp) protein (322aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLD8_9MICO
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD33930.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_4177_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20068..20931
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L772_9ACTO rbh
Carbohydrate ABC transporter membrane protein {ECO:0000313|EMBL:CCH19669.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromono
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_4177_14
unknown

Not on your lists

20931..21104
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4177_15
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21113..21466
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L771_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19668.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
scnpilot_cont_500_p_scaffold_4177_16
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21514..22719
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F3975 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD33927.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_4177_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22751..23635
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365D7CE rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:BAJ75059.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
scnpilot_cont_500_p_scaffold_4177_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23632..24396
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLD3_9MICO
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:GAD33925.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.
dehydrogenase with different specificities
scnpilot_cont_500_p_scaffold_4177_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24441..25280
DNA (840bp) protein (280aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLP0_9MICO
5-keto 4-deoxyuronate isomerase
scnpilot_cont_500_p_scaffold_4177_20
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25470..26864
DNA (1395bp) protein (465aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EX82_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDN78059.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
Displaying 20 items

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