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scnpilot_cont_500_p_scaffold_4262

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4262_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..795)
DNA (795bp) protein (265aa)
twin-arginine translocation pathway signal n=1 Tax=Bradyrhizobium japonicum RepID=UPI000382023A
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25318.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
scnpilot_cont_500_p_scaffold_4262_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(820..2520)
DNA (1701bp) protein (567aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDW9_METNO rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACL55691.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="
scnpilot_cont_500_p_scaffold_4262_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2654..3529
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDW8_METNO rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR78739.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
LysR family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_4262_4
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4328)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A0M3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KFC93120.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella g
hypothetical protein
scnpilot_cont_500_p_scaffold_4262_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4447..4887
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80138.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
scnpilot_cont_500_p_scaffold_4262_6
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4895..5374)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RB97_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ72172.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
scnpilot_cont_500_p_scaffold_4262_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5434..6975)
DNA (1542bp) protein (514aa)
NitT/TauT family transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN81_9BRAD rbh
NitT/TauT family transport system permease {ECO:0000313|EMBL:ERF86268.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
membrane protein
scnpilot_cont_500_p_scaffold_4262_8
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7195..7938
DNA (744bp) protein (248aa)
pqqc-like protein (coenzyme pqq synthesis c) (EC:1.3.3.11)
Coenzyme PQQ synthesis protein C n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X129_9BURK rbh
Coenzyme PQQ synthesis protein C {ECO:0000313|EMBL:EON13226.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea s
scnpilot_cont_500_p_scaffold_4262_9
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7964..8290
DNA (327bp) protein (109aa)
ferredoxin n=1 Tax=Cupriavidus sp. WS RepID=UPI0003708B08
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AJC16549.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
scnpilot_cont_500_p_scaffold_4262_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8324..8626
DNA (303bp) protein (101aa)
UDPglucose 6-dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPB1_9BRAD
UDPglucose 6-dehydrogenase {ECO:0000313|EMBL:ERF86271.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
hypothetical protein
scnpilot_cont_500_p_scaffold_4262_11
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8636..8782
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000362C4F0
ferredoxin, 2fe-2S iron-sulfur cluster binding domain
Putative Ferredoxin, 2Fe-2S iron-sulfur cluster binding domain {ECO:0000313|EMBL:CAQ72180.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cup
Displaying 11 items

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