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scnpilot_cont_500_p_scaffold_4388

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_4388_1
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..384)
DNA (384bp) protein (128aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source
histidine kinase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003031314
integral membrane sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_4388_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(381..1145)
DNA (765bp) protein (255aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H645_CELFA rbh
winged helix family transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEE46775.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Ce
scnpilot_cont_500_p_scaffold_4388_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1327..2628
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1E4_CELGA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI12828.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (s
scnpilot_cont_500_p_scaffold_4388_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2625..3674
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H643_CELFA rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46773.1}; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomona
scnpilot_cont_500_p_scaffold_4388_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3920..4720
DNA (801bp) protein (267aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBN1_CELFN
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADG74126.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cell
scnpilot_cont_500_p_scaffold_4388_6
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4779..5147)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F69B77
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEE46771.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 201
scnpilot_cont_500_p_scaffold_4388_7
unknown

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5300..5551
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_4388_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5839..7068
DNA (1230bp) protein (410aa)
Type II secretion system protein E n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H617_CELFA
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEE46747.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain AT
scnpilot_cont_500_p_scaffold_4388_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7076..7930
DNA (855bp) protein (285aa)
Type II secretion system F domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBP1_CELFN
type II secretion system F domain-containing protein
Type II secretion system F domain protein {ECO:0000313|EMBL:ADG74136.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigen
scnpilot_cont_500_p_scaffold_4388_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7927..8847
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E279EA rbh
Type II secretion system F domain-containing protein
Type II secretion system F domain protein {ECO:0000313|EMBL:AEE46745.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (st
scnpilot_cont_500_p_scaffold_4388_11
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8890..9096
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Actinomyces naeslundii str. Howell 279 RepID=J3JJA4_ACTNA
Uncharacterized protein {ECO:0000313|EMBL:EWT00239.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
scnpilot_cont_500_p_scaffold_4388_12
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9147..9461
DNA (315bp) protein (105aa)
TadE family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H613_CELFA
TadE family protein
TadE family protein {ECO:0000313|EMBL:AEE46743.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20
scnpilot_cont_500_p_scaffold_4388_13
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9458..9910
DNA (453bp) protein (151aa)
TadE family protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBP5_CELFN
TadE family protein
TadE family protein {ECO:0000313|EMBL:ADG74140.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / D
scnpilot_cont_500_p_scaffold_4388_14
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10000..10410
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBP6_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG74141.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavige
scnpilot_cont_500_p_scaffold_4388_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10651..11667
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036AFE39 rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ75106.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
scnpilot_cont_500_p_scaffold_4388_16
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11790..13055
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035F6A97 rbh
Sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:KFI88651.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifid
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_4388_17
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13144..13713
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003680FA2
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KFI88652.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteriu
ABC transporter permease
Displaying 17 items

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