ggKbase home page

scnpilot_cont_500_p_scaffold_3339

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3339_1
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..517
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9G7_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ50387.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium
scnpilot_cont_500_p_scaffold_3339_2
bacterium YEK0313, Bacteria

Not on your lists

comp(569..1546)
DNA (978bp) protein (326aa)
Extra-cytoplasmic solute receptor family protein 110 n=2 Tax=Alicycliphilus denitrificans RepID=F4GBX6_ALIDK
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10676.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extra-cytoplasmic solute receptor family protein
scnpilot_cont_500_p_scaffold_3339_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1573..2133)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003685A8F
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGB84756.1}; TaxID=1249634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescen
scnpilot_cont_500_p_scaffold_3339_4
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2166..3038)
DNA (873bp) protein (291aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA158-B04 RepID=UPI00036C4100 rbh
Fumarylacetoacetate hydrolase domain-containing protein 2A {ECO:0000313|EMBL:EFL87721.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrens
scnpilot_cont_500_p_scaffold_3339_5
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3050..3934)
DNA (885bp) protein (295aa)
Polysaccharide deacetylase family protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3G0_9RHOB
Polysaccharide deacetylase {ECO:0000313|EMBL:KFE33392.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_3339_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4024..5010)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LD55_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11148.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
scnpilot_cont_500_p_scaffold_3339_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5022..6236)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07R66_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:CDX11216.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_3339_8
unknown

Not on your lists

comp(6374..7135)
DNA (762bp) protein (254aa)
ABC transporter, inner membrane subunit n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ25_NITWN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium
ABC transporter permease
scnpilot_cont_500_p_scaffold_3339_9
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7132..8070)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E8DC4B
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ABC transporter
scnpilot_cont_500_p_scaffold_3339_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8152..9078)
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRC8_9BRAD
scnpilot_cont_500_p_scaffold_3339_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9538..10218
DNA (681bp) protein (227aa)
Outer membrane protein Omp31 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8INA9_AZOC5
outer membrane protein Omp31
Outer membrane protein Omp31 {ECO:0000313|EMBL:BAF89725.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium ca
scnpilot_cont_500_p_scaffold_3339_12
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

10297..10743
DNA (447bp) protein (149aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVT8_9CHLR
short-chain dehydrogenase/reductase SDR Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
short-chain dehydrogenase/reductase SDR
Displaying 12 items

View Taxonomy