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scnpilot_cont_500_p_scaffold_1224

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1224_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1624)
DNA (1623bp) protein (541aa)
methylase n=1 Tax=Sphingobium xenophagum RepID=UPI00036641BA
Uncharacterized protein {ECO:0000313|EMBL:GAO52904.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
methylase/helicase
scnpilot_cont_500_p_scaffold_1224_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1876..3072
DNA (1197bp) protein (399aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3CE13 rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:KHS45081.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
cobyrinic acid a,c-diamide synthase
scnpilot_cont_500_p_scaffold_1224_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3062..4126
DNA (1065bp) protein (355aa)
chromosome partitioning protein ParB n=1 Tax=Sphingomonas melonis RepID=UPI000368E5D2 rbh
chromosome-partitioning protein ParB
Chromosome partitioning protein, ParB family {ECO:0000313|EMBL:CCA89896.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
scnpilot_cont_500_p_scaffold_1224_4
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4155..5438
DNA (1284bp) protein (428aa)
Plasmid replication initiator protein-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKC8_9SPHN rbh
plasmid replication initiator protein
Plasmid replication initiator protein-like protein {ECO:0000313|EMBL:EHJ58231.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
scnpilot_cont_500_p_scaffold_1224_5
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6244..6948
DNA (705bp) protein (235aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2FTF4_9SPHN
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:EJL20405.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
lytic transglycosylase
scnpilot_cont_500_p_scaffold_1224_6
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6915..8303)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N913_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT07420.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_1224_7
unknown

Not on your lists

comp(8631..9173)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1224_8
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9900..10229
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2G3Q2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24270.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1224_9
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10468..10752
DNA (285bp) protein (95aa)
Type IV conjugative transfer system protein TraL n=1 Tax=Novosphingobium sp. AP12 RepID=J3A014_9SPHN
Scaffold12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31284.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
conjugal transfer protein TraL
scnpilot_cont_500_p_scaffold_1224_10
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10754..11317
DNA (564bp) protein (188aa)
TraE protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GNF7_9SPHN
TraE protein {ECO:0000313|EMBL:EJL24268.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
TraE family protein
scnpilot_cont_500_p_scaffold_1224_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11314..12120
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7S3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59302.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
conjugal transfer protein TraK
scnpilot_cont_500_p_scaffold_1224_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..13523
DNA (1407bp) protein (469aa)
Sex pilus assembly and synthesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7S2_9SPHN
Sex pilus assembly and synthesis protein {ECO:0000313|EMBL:EGD59303.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
TraB pilus assembly family protein
scnpilot_cont_500_p_scaffold_1224_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13535..14437
DNA (903bp) protein (301aa)
Protein disulfide-isomerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7S1_9SPHN
Protein disulfide-isomerase {ECO:0000313|EMBL:EGD59304.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
thiol:disulfide interchange protein DsbC
scnpilot_cont_500_p_scaffold_1224_14
Sphingomonas sp. ERG5, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14434..15252
DNA (819bp) protein (273aa)
Outer membrane lipoprotein TraV of type IV secretion system n=1 Tax=Sphingomonas sp. ERG5 RepID=T1YW90_9SPHN
Outer membrane lipoprotein TraV of type IV secretion system {ECO:0000313|EMBL:AGU69267.1}; TaxID=1381597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
hypothetical protein
scnpilot_cont_500_p_scaffold_1224_15
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15259..17805
DNA (2547bp) protein (849aa)
Type-IV secretion system protein TraC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7R9_9SPHN
Type-IV secretion system protein TraC {ECO:0000313|EMBL:EGD59306.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
Type-IV secretion system protein TraC
scnpilot_cont_500_p_scaffold_1224_16
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17802..18143
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002FB4C27
Uncharacterized protein {ECO:0000313|EMBL:EGD59307.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1224_17
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18140..18760
DNA (621bp) protein (207aa)
conjugal transfer protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4CDE0
Uncharacterized protein {ECO:0000313|EMBL:KHL24264.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
hypothetical protein
scnpilot_cont_500_p_scaffold_1224_18
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18744..19280
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000367C420
Conjugal transfer protein {ECO:0000313|EMBL:EGD59309.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
type IV secretory pathway protease TraF-like protein
scnpilot_cont_500_p_scaffold_1224_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19277..20023
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HRV5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB02070.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
Type-F conjugative transfer system protein TraW
scnpilot_cont_500_p_scaffold_1224_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20020..20340
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KHS49443.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_cont_500_p_scaffold_1224_21
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20333..21352
DNA (1020bp) protein (340aa)
Sex pilus assembly and synthesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8U6_9SPHN
Sex pilus assembly and synthesis protein {ECO:0000313|EMBL:EGD59311.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
conjugal transfer protein
Displaying 21 items

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