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scnpilot_cont_500_p_scaffold_1788

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1788_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50..310
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000370DA5A
Uncharacterized protein {ECO:0000313|EMBL:EGD59346.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
N-terminus replication primase
scnpilot_cont_500_p_scaffold_1788_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307..738
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8R1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59347.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

762..1193
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8R2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59345.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1479..2420
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Neisseria sicca RepID=UPI0002F27673
Uncharacterized protein {ECO:0000313|EMBL:KIA96188.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyung
scnpilot_cont_500_p_scaffold_1788_5
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2744..3751)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei MSHR346 RepID=C4KS07_BURPE rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ACQ98548.1}; TaxID=536230 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.
scnpilot_cont_500_p_scaffold_1788_6
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4121..4582)
DNA (462bp) protein (154aa)
Regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8R5_9SPHN
Regulator {ECO:0000313|EMBL:EGD59342.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenif
MucR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1788_7
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4654..4905)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8R6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59341.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4902..6149)
DNA (1248bp) protein (416aa)
type VI secretion protein ImpB n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002F2C025 rbh
DNA-directed DNA polymerase {ECO:0000313|EMBL:EGD59340.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..7012
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z8R9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59338.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_10
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7079..7468
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60453.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
inner membrane protein
scnpilot_cont_500_p_scaffold_1788_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7491..7868
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60452.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7868..8155
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60451.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8182..9036
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59334.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
TOPRIM domain-containing protein
scnpilot_cont_500_p_scaffold_1788_14
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9048..9731)
DNA (684bp) protein (228aa)
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4L0_9SPHN
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EGD60449.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_15
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9769..10581
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00036B6B3D
Uncharacterized protein {ECO:0000313|EMBL:CDZ90240.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
scnpilot_cont_500_p_scaffold_1788_16
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10659..11627
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4K9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD60448.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_17
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11745..12125
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59331.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_18
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12369..12818
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8S7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59330.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_19
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12919..13146)
DNA (228bp) protein (76aa)
Helix-turn-helix domain-containing protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN66_9PROT
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKF06377.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" so
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_1788_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13285..13467
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4N1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60442.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_21
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14004..14333
DNA (330bp) protein (110aa)
Single-stranded DNA-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4N0_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
single-strand binding protein/primosomal replication protein n
scnpilot_cont_500_p_scaffold_1788_22
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14384..14713
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8T1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59326.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_23
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14760..15311)
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=4313407 bin=GWF2_Geobacter_54_21 species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWC2_Geobacteraceae_55_20_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15681..16655
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8T3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59324.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_25
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16639..17043)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000314FC6F
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_1788_26
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17534..17824
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4M2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60433.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_1788_27
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17814..19298
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4M1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60432.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
Displaying 27 items

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