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scnpilot_cont_500_p_scaffold_8

Search features with annotation key words

Displaying items 61-90 of 586 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_8_61
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71924..72586
DNA (663bp) protein (221aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IC38_9SPHN rbh
scnpilot_cont_500_p_scaffold_8_62
Acetobacter indonesiensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72600..73538
DNA (939bp) protein (313aa)
deoxyribodipyrimidine photolyase n=1 Tax=Sphingomonas elodea RepID=UPI0002631AA0 rbh
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:GAN61896.1}; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetob
deoxyribodipyrimidine photolyase
scnpilot_cont_500_p_scaffold_8_63
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73873..79344
DNA (5472bp) protein (1824aa)
Putative autotransporter protein (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2H7Y4_9SPHN rbh
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EZP55137.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
outer membrane autotransporter barrel domain-containing protein
scnpilot_cont_500_p_scaffold_8_64
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79464..80786)
DNA (1323bp) protein (441aa)
FAD dependent oxidoreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF43_NOVAD rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABP64554.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_cont_500_p_scaffold_8_65
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80840..82030)
DNA (1191bp) protein (397aa)
Membrane protein-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF44_NOVAD rbh
membrane protein-like protein
Membrane protein-like protein {ECO:0000313|EMBL:ABP64555.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_cont_500_p_scaffold_8_66
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82055..82447)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF45_NOVAD
endoribonuclease L-PSP Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
endoribonuclease L-PSP
scnpilot_cont_500_p_scaffold_8_67
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82447..83631)
DNA (1185bp) protein (395aa)
Alanine racemase domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF46_NOVAD rbh
alanine racemase domain-containing protein rbh
Alanine racemase domain protein {ECO:0000313|EMBL:ABP64557.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
scnpilot_cont_500_p_scaffold_8_68
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83732..85300)
DNA (1569bp) protein (523aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF47_NOVAD rbh
extracellular solute-binding protein rbh
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABP64558.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
scnpilot_cont_500_p_scaffold_8_69
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85297..86739)
DNA (1443bp) protein (481aa)
Aldehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF48_NOVAD rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABP64559.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
scnpilot_cont_500_p_scaffold_8_70
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86848..87765
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF49_NOVAD rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABP64560.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_8_71
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87897..88823
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037CCFE2 rbh
ABC transporter {ECO:0000313|EMBL:KGB56708.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.
multidrug ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_8_72
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88820..89590
DNA (771bp) protein (257aa)
sugar ABC transporter permease n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036F1980 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella a
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_8_73
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89705..91354
DNA (1650bp) protein (550aa)
ABC transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037D6E7A rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO39339.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_8_74
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91394..92446
DNA (1053bp) protein (351aa)
Acyltransferase 3 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IMR2_9SPHN
Acyltransferase {ECO:0000313|EMBL:KHK93630.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium mal
acyltransferase
scnpilot_cont_500_p_scaffold_8_75
unknown

Not on your lists

comp(92471..93001)
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_76
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93422..95491
DNA (2070bp) protein (690aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INV6_9SPHN rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65595.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_cont_500_p_scaffold_8_77
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95491..99705
DNA (4215bp) protein (1405aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INV5_9SPHN rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65594.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_8_78
unknown

Not on your lists

99718..99954
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_79
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99951..100934
DNA (984bp) protein (328aa)
Putative ribonuclease {ECO:0000313|EMBL:BAK65592.1}; EC=3.1.-.- {ECO:0000313|EMBL:BAK65592.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Putative ribonuclease n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INV3_9SPHN rbh
putative ribonuclease
scnpilot_cont_500_p_scaffold_8_80
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101132..104146
DNA (3015bp) protein (1005aa)
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E649 rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABZ71265.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_8_81
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104254..105816
DNA (1563bp) protein (521aa)
tryptophan halogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B424B6 rbh
tryptophan halogenase
Tryptophan halogenase {ECO:0000313|EMBL:ABZ71266.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (str
scnpilot_cont_500_p_scaffold_8_82
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105844..106737
DNA (894bp) protein (298aa)
fructokinase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AF3 rbh
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:EJK84753.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
ROK family protein
scnpilot_cont_500_p_scaffold_8_83

Not on your lists

comp(106742..107917)
DNA (1176bp) protein (392aa)
ROK family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E252 rbh
ROK family {ECO:0000313|EMBL:AGU11277.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ROK family protein
scnpilot_cont_500_p_scaffold_8_84
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108179..109486)
DNA (1308bp) protein (436aa)
MFS transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B775F9 rbh
MFS transporter, sugar porter family {ECO:0000313|EMBL:EJK84754.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
sugar transporter
scnpilot_cont_500_p_scaffold_8_85
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109550..113083
DNA (3534bp) protein (1178aa)
glycosyl hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6F3A4 rbh
Glycosyl hydrolase {ECO:0000313|EMBL:AIT06466.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;
glycosyl hydrolase
scnpilot_cont_500_p_scaffold_8_86
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113080..114546
DNA (1467bp) protein (489aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037FB61E rbh
carboxylesterase type B
scnpilot_cont_500_p_scaffold_8_87
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114543..115280
DNA (738bp) protein (246aa)
acylhydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B54F4C
GDSL family lipase
GDSL family lipase {ECO:0000313|EMBL:AJP71742.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WH
scnpilot_cont_500_p_scaffold_8_88
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115277..116113
DNA (837bp) protein (279aa)
Putative mannose-6-phosphate isomerase GmuF {ECO:0000313|EMBL:AKH42777.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AKH42777.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K8J8_9SPHN
mannose-6-phosphate isomerase
scnpilot_cont_500_p_scaffold_8_89
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

116110..117351
DNA (1242bp) protein (414aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bactero
Alpha-galactosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFY1_RHOM4 rbh
alpha-galactosidase
scnpilot_cont_500_p_scaffold_8_90
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117364..118662
DNA (1299bp) protein (433aa)
glucose transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B63DFE
glucose/galactose transporter
Glucose/galactose transporter {ECO:0000313|EMBL:ABF53109.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
Displaying items 61-90 of 586 in total

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