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scnpilot_cont_500_p_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 586 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_8_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..802
DNA (801bp) protein (267aa)
Vanillin dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7R5_NOVAD
VANILLIN dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:GAO53876.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_8_2
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

747..1118
DNA (372bp) protein (124aa)
salicylaldehyde dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5E4C5
Salicylaldehyde dehydrogenase {ECO:0000313|EMBL:KHL25652.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobac
aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_8_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1160..2590
DNA (1431bp) protein (477aa)
2-ketoglutaric semialdehyde dehydrogenase {ECO:0000313|EMBL:GAO56419.1}; EC=1.2.1.26 {ECO:0000313|EMBL:GAO56419.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7AE8F
putative succinate-semialdehyde dehydrogenase
scnpilot_cont_500_p_scaffold_8_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2636..5089)
DNA (2454bp) protein (818aa)
Aconitate hydratase {ECO:0000313|EMBL:GAO56421.1}; EC=4.2.1.3 {ECO:0000313|EMBL:GAO56421.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Aconitate hydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPW9_9SPHN rbh
aconitate hydratase
scnpilot_cont_500_p_scaffold_8_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5094..6056)
DNA (963bp) protein (321aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:GAO56422.1}; EC=4.1.3.4 {ECO:0000313|EMBL:GAO56422.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
4-hydroxy 2-oxovalerate aldolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX0_9SPHN rbh
4-hydroxy-2-ketovalerate aldolase
scnpilot_cont_500_p_scaffold_8_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6171..6884
DNA (714bp) protein (238aa)
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX1_9SPHN
Transcriptional regulator of iclR family {ECO:0000313|EMBL:GAO56423.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
IclR family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..8123)
DNA (1227bp) protein (409aa)
Putative acyl-CoA transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX2_9SPHN rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAO56424.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi
putative acyl-CoA transferase
scnpilot_cont_500_p_scaffold_8_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8127..9323)
DNA (1197bp) protein (399aa)
Salicylate hydroxylase {ECO:0000313|EMBL:GAO56425.1}; EC=1.14.13.1 {ECO:0000313|EMBL:GAO56425.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX3_9SPHN rbh
putative oxidoreductase
scnpilot_cont_500_p_scaffold_8_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9368..10303)
DNA (936bp) protein (312aa)
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:GAO56426.1}; EC=1.13.11.4 {ECO:0000313|EMBL:GAO56426.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX4_9SPHN rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_8_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10311..11201)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX5_9SPHN rbh
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:GAO56427.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
hypothetical protein
scnpilot_cont_500_p_scaffold_8_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11392..13701)
DNA (2310bp) protein (770aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56428.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor-like protein
scnpilot_cont_500_p_scaffold_8_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13976..15448
DNA (1473bp) protein (491aa)
Putative dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX7_9SPHN rbh
putative dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAK65805.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK
scnpilot_cont_500_p_scaffold_8_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15744..16361)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX8_9SPHN
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO56430.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16354..16866)
DNA (513bp) protein (171aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX9_9SPHN
NADH-FMN oxidoreductase {ECO:0000313|EMBL:GAO56431.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
putative oxidoreductase
scnpilot_cont_500_p_scaffold_8_15
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16863..18323)
DNA (1461bp) protein (487aa)
Aromatic ring hydroxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY0_9SPHN rbh
aromatic ring hydroxylase
Aromatic ring hydroxylase {ECO:0000313|EMBL:BAK65808.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp
scnpilot_cont_500_p_scaffold_8_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18503..20050
DNA (1548bp) protein (516aa)
Putative FAD-linked oxidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY1_9SPHN rbh
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:GAO56433.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
putative FAD-linked oxidase
scnpilot_cont_500_p_scaffold_8_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20136..21401
DNA (1266bp) protein (422aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56434.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_8_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21413..22972
DNA (1560bp) protein (520aa)
Putative FAD-linked oxidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY4_9SPHN rbh
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:GAO56436.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
putative FAD-linked oxidase
scnpilot_cont_500_p_scaffold_8_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22969..23397
DNA (429bp) protein (143aa)
Cytochrome c family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56437.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cytochrome c family protein
scnpilot_cont_500_p_scaffold_8_20
unknown

Not on your lists

23394..23822
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23850..25475
DNA (1626bp) protein (542aa)
Choline dehydrogenase {ECO:0000313|EMBL:GAO56439.1}; EC=1.1.99.1 {ECO:0000313|EMBL:GAO56439.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY7_9SPHN rbh
choline dehydrogenase rbh
scnpilot_cont_500_p_scaffold_8_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25472..26947
DNA (1476bp) protein (492aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAO56440.1}; EC=1.2.1.3 {ECO:0000313|EMBL:GAO56440.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY8_9SPHN rbh
NAD-dependent aldehyde dehydrogenase rbh
scnpilot_cont_500_p_scaffold_8_23
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27008..27970)
DNA (963bp) protein (321aa)
AraC family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z360_9SPHN rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EGD60953.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
araC family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28050..28745
DNA (696bp) protein (232aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z361_9SPHN rbh
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EGD60952.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
ThiJ/PfpI domain-containing protein
scnpilot_cont_500_p_scaffold_8_25
Novosphingobium sp. MBES04, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28815..32018)
DNA (3204bp) protein (1068aa)
cation transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000364BF1B
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:GAM07471.1}; TaxID=1206458 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
CzcA family heavy metal efflux protein
scnpilot_cont_500_p_scaffold_8_26
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32022..33152)
DNA (1131bp) protein (377aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQB7_SPHAL
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF54155.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sourc
scnpilot_cont_500_p_scaffold_8_27
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33162..34412)
DNA (1251bp) protein (417aa)
Outer membrane efflux protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9K1_SPHWW
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABQ68967.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
scnpilot_cont_500_p_scaffold_8_28
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34481..34810)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C777
Uncharacterized protein {ECO:0000313|EMBL:KER35749.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium luc
hypothetical protein
scnpilot_cont_500_p_scaffold_8_29
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34967..35419
DNA (453bp) protein (151aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
alkylhydroperoxidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B67687
alkylhydroperoxidase-like protein
scnpilot_cont_500_p_scaffold_8_30
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35416..36258
DNA (843bp) protein (281aa)
RNA polymerase sigma factor SigJ n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B354DD rbh
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:EJL30929.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
ECF subfamily RNA polymerase sigma-24 subunit
Displaying items 1-30 of 586 in total

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