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scnpilot_cont_500_p_scaffold_8_21

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 23850..25475

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase {ECO:0000313|EMBL:GAO56439.1}; EC=1.1.99.1 {ECO:0000313|EMBL:GAO56439.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 539.0
  • Bit_score: 863
  • Evalue 1.70e-247
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPY7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 536.0
  • Bit_score: 805
  • Evalue 2.40e-230
  • rbh
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 532.0
  • Bit_score: 805
  • Evalue 6.70e-231
  • rbh

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
GTGTCCAAACTGGAATTCGACTATATCATCGTGGGCGCCGGATCGGCGGGCAGCGTGCTGGCCAACCGGCTGAGCGCCGATCCGCAAAACCGCGTCCTCCTGCTCGAAGCGGGAGGCAAGGCCAACCACCCCTATATCCGTATGCCGCTGGGCTTTCTTCAGGCCCTGCGCAATCCGGCGCTGACCTGGCAATTCGCCTCCGAGCCGGAGCCGCATCTGGACGGCAAGGTCTTTCCCTTGCCCCGGGGACGGGTGCTGGGCGGCTCATCCTCGATCAACGGCACCGTGCATTTCCGGGGCCATCCTTTCGATTTCGACGATTGGGCCGCTCTGGGCTGCACGGGCTGGGATTACAAAAGCGTGCTGCCCTATTTCAAACGCAGCGAGGACCATTGGACCGGCGGCAATCCATGGCGCGGCAAGGGCGGGCCGATCGGCGTGCGCCCGGTCAATGTTTCGCGCCTGATGGCCGAGGAATTGCGCGCTTCGGCCGCCCTGCAGGGCTATGCCTATAATCCCGATTATGACGGCATCGGCAATGAGGGCTGCGCCGATGTGCAGGTCGCGCTGAAAGACGGCGAGCGCTGCGGCGGGGCCAAGGCCTATCTGGAGCCGATCCGCGACCGCTCCAACCTGCGCGTCCTCACCCATGCGCAGGTCAGCCGCATCCTGTTTTCCGGCAAGCGCGCCATCGGCATCGCCTTTGAAAGGGAAGGCGTCGAGCAGACCGCCACGGCCCGGCGCGAGATCATCCTGTGCGGCGGCGCCTATGGTTCGCCGCAATTGCTGATGCTGTCGGGCATTGGCCGCGCGCCGGATCTGGCGCGGCACGGCATTGGCGTGGTGCATGAATTGCCGGGCGTCGGGCAAAACCTGCAGGAGCATGTGCGCCTTGCCCATCAATATGACGCCGCCCCGCCCCACAGCTTTGCCCAGCAATTGCGTTTTGACCGGGCTGCTTTGGCCTTTTTGCGCTGGTATTTCCTGCGCTCCGGCCCCTTTGCCAATCAGATCGCGGCGGCCTGCATCCTGGCCCGTTCGCAGGACGGGCTCGACCGACCCGATCTTCAGATCATGTCCAGCCCGGTGCGGGTGGACGCCAATATCTGGTTCCCCGGCTTCGCTCGCCCCAAGCAGGACTGCTTCTACAATTCGATCTGCCTGCTGCGTCCGAAAAGCCGGGGCAGCGTGTCCCTGCAGGACAGCGATTTCCGCTCGGCCCCACGCATCCATCTCAACCTGCTGGGCGATGAGCGCGACTGGGATGTGCTGAAAAAGGGCCTGACGATTTCACGGCGGATTTTCGCCAATGGTCCGATTGCCGATTATGTCATCGAAGAAACCTTGCCCGGCGCCCATATCACCAGCGACGAGGCGCTCGACGCGATGAAGGCGCAATTGTCCGGCGTGGTGCATCATCCGGTCGGCACCTGCGCGATGGGCCTGGGGGCCGATGCGGTGGTCGATCCGCAATTGCGGGTGCATGGCATCGCTGGCCTGCGCGTGGCCGATGCCTCGATCATGCCGCTGCTGGTGGGGGCCAACACCAATGCCGCCGCCGTGATGATCGGCGAAAAAGCCAGCGATCTCATTCTGCAATCCGCGCGTCAGGAGCAACAAGCATGA
PROTEIN sequence
Length: 542
VSKLEFDYIIVGAGSAGSVLANRLSADPQNRVLLLEAGGKANHPYIRMPLGFLQALRNPALTWQFASEPEPHLDGKVFPLPRGRVLGGSSSINGTVHFRGHPFDFDDWAALGCTGWDYKSVLPYFKRSEDHWTGGNPWRGKGGPIGVRPVNVSRLMAEELRASAALQGYAYNPDYDGIGNEGCADVQVALKDGERCGGAKAYLEPIRDRSNLRVLTHAQVSRILFSGKRAIGIAFEREGVEQTATARREIILCGGAYGSPQLLMLSGIGRAPDLARHGIGVVHELPGVGQNLQEHVRLAHQYDAAPPHSFAQQLRFDRAALAFLRWYFLRSGPFANQIAAACILARSQDGLDRPDLQIMSSPVRVDANIWFPGFARPKQDCFYNSICLLRPKSRGSVSLQDSDFRSAPRIHLNLLGDERDWDVLKKGLTISRRIFANGPIADYVIEETLPGAHITSDEALDAMKAQLSGVVHHPVGTCAMGLGADAVVDPQLRVHGIAGLRVADASIMPLLVGANTNAAAVMIGEKASDLILQSARQEQQA*