ggKbase home page

scnpilot_cont_500_p_scaffold_8_11

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(11392..13701)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 776.0
  • Bit_score: 1178
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56428.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 783.0
  • Bit_score: 1257
  • Evalue 0.0
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 776.0
  • Bit_score: 1178
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2310
ATGAAACGTTGCGATCGCGCGGCGATGTTCCTGCTGGGCGTTGCGGCCAGCGCCTTGTTGCCCGCCGTGGCCCAGGCCGCCGAAGCGCCGCCGGCTCCGTCCAATGACGAAATCGTTGTAACGGCCCAATTCCGCAAGGAAAGCGCGCAAAAGACCGCCGTTTCCATCGACGTGCTGTCCGCCGAAACGCTGAACCGCGCGGGCGTGGCGCAGGCCACCGACCTGGCCCGCCTTTCGCCCGGCGTTCAGATCACGCAGGGTGGCAGTGCGATTCAGGTCTATATCCGCGGCGCGGGCGATTTTTCGACCACCGGCTATTCCAATCCTGCCGTGGCGCAGGCCTATGACGGCGTGTTCGCCGCGCGCAGCCAGTTTGTCGCCGCCACTTTCTATGACCTCGAACGCGTCGAAGTGCTGAAGGGCCCGCAGGGCACGCTCTATGGCCGCAACGCCACGGGCGGCGCGCTCAACATCATCCCCGTCCAGCCCAAGCTGGGCCAGTTCGAGGGCTATGTCAGCGCCGGTTTCCAGAATTACAACGGCTATAATGCCGAAGGCGCGGTCAACATCCCGCTTGGCGAGAAGGTGGCCGTGCGCGCCTCGTTCCAGGGCGTCTCGCGCGATGGTTATATCACCGACGGCACCGATGATGACAAGCATCACGCGCTGCGCCTTCAGGTGAAGGCCCAGCCGACCGAGGCGCTGACCCTGCGTCTGGGCGTAAATTATCAGCATCTGGGCGGTCGCGGTCCGGGCAAGGTGGTTTATGAACCGACCGCCCCCAACGCGCCGGGCATCACTAATCCCCAGCCGATCATCCCGGCCAATCGCTGGACCTCGATCAACCAGTCGCTCAACACCCTGATCGGCAGCGTGACCGCGCCTCCGGGCATCTATCCGCTCGACACCAGCAAGGTCTATCAGAACGTCGATGTGCTGGGCATCAACGGCCATATCGACTGGAACCTTGGTCCGGCCGTGCTGACCGTGATCCCGGCCTATCAGCGCGTGACGCAGGACTCGCTGGTCATGCCCGCGCTCTATTTCGGCACGAACAATTATTTCACCGGCGCGCCGTCCGTCTCGGAAGGCCAGACGCTGGAAGTGCGCCTTGGCCATGCCGACAATCGCGTCAAATGGGTGATCGGCGGCTATTATTTCAACGAGGATCAGGACAGCTACAATGCCGTCCGCCTCGGCCGCGCCTCTGACACCGCCTTTATCGCCAAGCTGAACACCCGCGCCTATGCCGCCTTTGGCGAGGCGACCTATTCGCTGACCAGCCGTTTCCGCGCCACGGCGGGCCTGCGCTATACCGACGAAACCAAGTCCGTGGACGGCCATCGCTATGCCATCGCGGGCAGCCTTGCCTGTCCCACGGGCGGCACGGCCATCGGCGGCTCCTGCGAGATCCTGACCTCGTCGGGTACATGGGTGAAGGGCACCTATTCGGCCAAGCGACTGAATTACAAGGCAGGCGTCGAATTTGACGTGGCGCCCCAGAATATGCTCTATGCCAGCGTCGTCACCGGCTTCAAATCGGGCGGCCAGTCGAATGCCGACATCGACCCGTATAAGCCCGAGGATGTGACCGCCTATACGATCGGTTCGAAGAACCGCTTCTTTGGCCGCCTGCTGCTGATCAACGCCGAATTGTTCTATATGGACTACAAGAACCGGCAGGAGAATTTCTCGCAGCTCGATCGCGGCGGCGCGCAGGTTTCCTCGCTGTTCAACGCAGGCAAGGCTGTGGCCAAGGGCATCACGCTGGAGGCCACGCTGCGTCCGACGATGAATGACTCCTTCCATGTCGGCGTCGAATATACCGAGAGCAAGTACAAGGACTTCTCCTATCAGGTCTATCGTTCGGCCAGCCCCGATCCGACGACCACCTGCGGCGTGAGCGCCATTCCGGGCGGCAATGCGCGGATCGGCTATTGGACGGTCAATTGCAACGGCTTCCAATTGCCGCGCACGCCCAAGTTCTCGGGCAATGTCAATTACACCCACACGTTTGACCTGAAGGATGGCGCGCGGGTGGAATTCACGCCGGATATGAGCTTTGCTTCCTCGCGCTGGCTCTCTGCCGAATTTGTCGAGAATGCGCGGGCCGATGCCTATGCCCTGTTCAACGCCAGCCTGACCTATTACGCGCCGGGCGACCGTTTCTCGGTTCAGGCCTTTGTCCGCAACATCGGCAATACCGCCGTTTACACGGGCACCCAGCAATATCCCTTCATCGCCAATTACAATGGCCATGACATTGCGCCGCCGCGCACGTGGGGCGCCCGTGTGCGCGCCAAATTCTAA
PROTEIN sequence
Length: 770
MKRCDRAAMFLLGVAASALLPAVAQAAEAPPAPSNDEIVVTAQFRKESAQKTAVSIDVLSAETLNRAGVAQATDLARLSPGVQITQGGSAIQVYIRGAGDFSTTGYSNPAVAQAYDGVFAARSQFVAATFYDLERVEVLKGPQGTLYGRNATGGALNIIPVQPKLGQFEGYVSAGFQNYNGYNAEGAVNIPLGEKVAVRASFQGVSRDGYITDGTDDDKHHALRLQVKAQPTEALTLRLGVNYQHLGGRGPGKVVYEPTAPNAPGITNPQPIIPANRWTSINQSLNTLIGSVTAPPGIYPLDTSKVYQNVDVLGINGHIDWNLGPAVLTVIPAYQRVTQDSLVMPALYFGTNNYFTGAPSVSEGQTLEVRLGHADNRVKWVIGGYYFNEDQDSYNAVRLGRASDTAFIAKLNTRAYAAFGEATYSLTSRFRATAGLRYTDETKSVDGHRYAIAGSLACPTGGTAIGGSCEILTSSGTWVKGTYSAKRLNYKAGVEFDVAPQNMLYASVVTGFKSGGQSNADIDPYKPEDVTAYTIGSKNRFFGRLLLINAELFYMDYKNRQENFSQLDRGGAQVSSLFNAGKAVAKGITLEATLRPTMNDSFHVGVEYTESKYKDFSYQVYRSASPDPTTTCGVSAIPGGNARIGYWTVNCNGFQLPRTPKFSGNVNYTHTFDLKDGARVEFTPDMSFASSRWLSAEFVENARADAYALFNASLTYYAPGDRFSVQAFVRNIGNTAVYTGTQQYPFIANYNGHDIAPPRTWGARVRAKF*