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scnpilot_cont_500_p_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 405 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_10_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..613
DNA (612bp) protein (204aa)
Vanillin dehydrogenase {ECO:0000313|EMBL:ABD26108.1}; EC=1.2.1.67 {ECO:0000313|EMBL:ABD26108.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
salicylaldehyde dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5E4C5
aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_10_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

613..1155
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7L2_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26161.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_10_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1142..2491
DNA (1350bp) protein (450aa)
MmgE/PrpD family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA8_NOVAD rbh
MmgE/PrpD family protein
MmgE/PrpD family protein {ECO:0000313|EMBL:ABP64269.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_10_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2488..3255)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA4_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO53080.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_10_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3255..4754)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA3_NOVAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP64264.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_10_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..6936)
DNA (2163bp) protein (721aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA2_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO53082.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_10_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6990..8153)
DNA (1164bp) protein (388aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA1_NOVAD rbh
Bcr/CflA subfamily drug resistance transporter
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:ABP64262.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
scnpilot_cont_500_p_scaffold_10_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8150..9433)
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEA0_NOVAD rbh
Nitrate/nitrite transporter {ECO:0000313|EMBL:GAO53084.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
major facilitator transporter
scnpilot_cont_500_p_scaffold_10_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9526..10551
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICN3_9SPHN rbh
Transcriptional regulators {ECO:0000313|EMBL:GAO53087.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_10_10

Not on your lists

comp(10548..10934)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W5D8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU09953.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_10_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..12616)
DNA (1650bp) protein (550aa)
Carboxylic ester hydrolase {ECO:0000256|RuleBase:RU361235}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361235};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
Carboxylesterase type B n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZA4_9BRAD rbh
carboxylesterase
scnpilot_cont_500_p_scaffold_10_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12653..14518)
DNA (1866bp) protein (622aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:CCA92153.1}; EC=1.13.11.27 {ECO:0000313|EMBL:CCA92153.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL51_9SPHN rbh
scnpilot_cont_500_p_scaffold_10_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..15440)
DNA (909bp) protein (303aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=748247 species="Bacteria; Prote
Shikimate dehydrogenase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5U1_9RHOO
aroE; shikimate dehydrogenase substrate binding domain protein
scnpilot_cont_500_p_scaffold_10_14
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15499..18285)
DNA (2787bp) protein (929aa)
TonB-denpendent receptor n=1 Tax=Sphingobium sp. HDIP04 RepID=T0H8A6_9SPHN rbh
TonB-dependent receptor-like protein
TonB-denpendent receptor {ECO:0000313|EMBL:EQB09247.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_cont_500_p_scaffold_10_15
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18385..19647)
DNA (1263bp) protein (421aa)
D-galactonate transporter n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2IM28_9PSED rbh
D-galactonate transporter {ECO:0000313|EMBL:ENA28432.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
D-galactonate transporter DgoT
scnpilot_cont_500_p_scaffold_10_16
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..20093)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
aroQ-2; 3-dehydroquinate dehydratase 2 (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CNY9_9RHIZ
scnpilot_cont_500_p_scaffold_10_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

20194..22179
DNA (1986bp) protein (662aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82629.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82629.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028C8_SOLUE rbh
scnpilot_cont_500_p_scaffold_10_18
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22176..23087
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003823C62
Trehalose utilization
Trehalose utilization {ECO:0000313|EMBL:AFL90355.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (s
scnpilot_cont_500_p_scaffold_10_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(23328..23612)
DNA (285bp) protein (95aa)
DNA uptake protein and related DNA-binding protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M9_SOLUE
DNA uptake protein and related DNA-binding protein-like protein
DNA uptake protein and related DNA-binding protein-like protein {ECO:0000313|EMBL:ABJ83040.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacte
scnpilot_cont_500_p_scaffold_10_20
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23609..24619)
DNA (1011bp) protein (337aa)
Dienelactone hydrolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EG78_9SPHN rbh
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:EHJ59767.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_10_21
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24723..25388)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000367E7F8
TetR family transcriptional regulator {ECO:0000313|EMBL:EYC51080.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemo
transcriptional regulator, TetR family
scnpilot_cont_500_p_scaffold_10_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25543..27294
DNA (1752bp) protein (584aa)
sodium/hydrogen exchanger n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7B5F0 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO57016.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
sodium/hydrogen exchanger
scnpilot_cont_500_p_scaffold_10_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27386..28567
DNA (1182bp) protein (394aa)
Cytochrome P450 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFI0_NOVAD rbh
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ABP64691.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium arom
scnpilot_cont_500_p_scaffold_10_24
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28564..29169)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4T5_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF87768.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
scnpilot_cont_500_p_scaffold_10_25
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29224..30552)
DNA (1329bp) protein (443aa)
Acetyl-CoA hydrolase n=1 Tax=Rhizobium sp. AP16 RepID=J2WXS7_9RHIZ
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:KEA08472.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
ach1; acetyl-CoA hydrolase
scnpilot_cont_500_p_scaffold_10_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30756..31757
DNA (1002bp) protein (334aa)
LacI family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD5DF
LacI family transcription regulator {ECO:0000313|EMBL:KHS48401.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_10_27
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31759..32622)
DNA (864bp) protein (288aa)
fructokinase; K00847 fructokinase [EC:2.7.1.4] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Fructokinase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBK3_ERYLH rbh
fructokinase
scnpilot_cont_500_p_scaffold_10_28
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32624..33793)
DNA (1170bp) protein (390aa)
levansucrase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C3A2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL45835.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
levansucrase
scnpilot_cont_500_p_scaffold_10_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33888..35936)
DNA (2049bp) protein (683aa)
Glycoside hydrolase clan GH-D n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1P2_LEPCP rbh
glycoside hydrolase clan GH-D
Glycoside hydrolase clan GH-D {ECO:0000313|EMBL:ACB35504.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATC
scnpilot_cont_500_p_scaffold_10_30
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35926..37353)
DNA (1428bp) protein (476aa)
sugar transporter n=2 Tax=Sphingomonas melonis RepID=UPI00037232C3 rbh
sugar transporter Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
sugar transporter
Displaying items 1-30 of 405 in total

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