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scnpilot_cont_500_p_scaffold_493

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_493_1
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

325..1653
DNA (1329bp) protein (443aa)
glycosidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC080 rbh
Glycosidase {ECO:0000313|EMBL:ETI65122.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
glycosidase PH1107-like protein
scnpilot_cont_500_p_scaffold_493_2
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1823..3415)
DNA (1593bp) protein (531aa)
67 kDa myosin-cross-reactive antigen family protein n=1 Tax=Zymomonas mobilis subsp. pomaceae (strain ATCC 29192 / JCM 10191 / NBRC 13757 / NCIMB 11200 / NRRL B-4491) RepID=F8ETF0_ZYMMT rbh
67 kDa myosin-cross-reactive antigen family protein
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:AEI37975.1}; TaxID=579138 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;
scnpilot_cont_500_p_scaffold_493_3
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3472..4344)
DNA (873bp) protein (291aa)
UPI0003D5B687 related cluster n=1 Tax=unknown RepID=UPI0003D5B687
ATP synthase F1 subunit gamma {ECO:0000313|EMBL:ETI65511.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
H+transporting two-sector ATPase subunit gamma
scnpilot_cont_500_p_scaffold_493_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4341..5858)
DNA (1518bp) protein (506aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA; ATP synthase F1, alpha subunit (EC:3.6.3.14)
UPI0003D66000 related cluster n=1 Tax=unknown RepID=UPI0003D66000 rbh
scnpilot_cont_500_p_scaffold_493_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5842..6594)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036AD619
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase delta (OSCP) subunit
scnpilot_cont_500_p_scaffold_493_6
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6604..6846)
DNA (243bp) protein (81aa)
F0F1 ATP synthase subunit C {ECO:0000313|EMBL:ETI65508.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ETI65508.1};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
atpE; ATP synthase F0, C subunit (EC:3.6.3.14)
F0F1 ATP synthase subunit C n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC456
scnpilot_cont_500_p_scaffold_493_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6848..7531)
DNA (684bp) protein (228aa)
F0F1 ATP synthase subunit A n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC455 rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
F0F1 ATP synthase subunit A
scnpilot_cont_500_p_scaffold_493_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..7794)
DNA (267bp) protein (89aa)
UPI0003D5A5B7 related cluster n=1 Tax=unknown RepID=UPI0003D5A5B7
Uncharacterized protein {ECO:0000313|EMBL:ETI65528.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_cont_500_p_scaffold_493_9
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7791..8078)
DNA (288bp) protein (96aa)
F0F1 ATPase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC453
F0F1 ATPase {ECO:0000313|EMBL:ETI65506.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
F0F1-ATPase subunit
scnpilot_cont_500_p_scaffold_493_10
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8075..8494)
DNA (420bp) protein (140aa)
F0F1 ATP synthase subunit epsilon n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC452
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
F0F1 ATP synthase subunit epsilon
scnpilot_cont_500_p_scaffold_493_11
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..9939)
DNA (1449bp) protein (483aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Sphingobium baderi LL03 RepID=T0GJ22_9SPHN rbh
scnpilot_cont_500_p_scaffold_493_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9973..12396)
DNA (2424bp) protein (808aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C3A rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:ETI65127.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
group 1 glycosyl transferase
scnpilot_cont_500_p_scaffold_493_13
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12708..12836)
DNA (129bp) protein (43aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJJ7_9SPHN
integrase
Integrase {ECO:0000313|EMBL:KKC26215.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
scnpilot_cont_500_p_scaffold_493_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12872..13801)
DNA (930bp) protein (310aa)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDAF3
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EQB05580.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
FAD dependent pyridine nucleotide-disulfide oxidoreductase protein
scnpilot_cont_500_p_scaffold_493_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14448..15044
DNA (597bp) protein (199aa)
Cytochrome C n=1 Tax=Sphingobium baderi LL03 RepID=T0I1N1_9SPHN
Cytochrome C {ECO:0000313|EMBL:KEZ15191.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphi
cytochrome c family protein
scnpilot_cont_500_p_scaffold_493_16
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15486..15617)
DNA (132bp) protein (44aa)
class III cytochrome C family protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC08A
Class III cytochrome C family protein {ECO:0000313|EMBL:KKC24165.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
conserved exported protein of unknown function
scnpilot_cont_500_p_scaffold_493_17
unknown

Not on your lists

15747..16043
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_493_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16178..16861)
DNA (684bp) protein (228aa)
iron reductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC08B rbh
Iron reductase {ECO:0000313|EMBL:ETI65130.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
conserved membrane protein of unknown function [Ferric reductase-like ]
scnpilot_cont_500_p_scaffold_493_19
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16861..18852)
DNA (1992bp) protein (664aa)
UPI0003D5EE6E related cluster n=1 Tax=unknown RepID=UPI0003D5EE6E rbh
FAD-binding oxidoreductase {ECO:0000313|EMBL:ETI65131.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
putative oxidoreductase, FAD-binding
scnpilot_cont_500_p_scaffold_493_20
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18863..19237)
DNA (375bp) protein (125aa)
UPI0003D6161D related cluster n=1 Tax=unknown RepID=UPI0003D6161D
Uncharacterized protein {ECO:0000313|EMBL:KKC24162.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_493_21
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19234..19665)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I0I4_9SPHN
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
scnpilot_cont_500_p_scaffold_493_22
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19994..20656)
DNA (663bp) protein (221aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPZ9_XANP2
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EXS68577.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
isoprenylcysteine carboxyl methyltransferase
scnpilot_cont_500_p_scaffold_493_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20653..20895)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XM23_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU53643.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_cont_500_p_scaffold_493_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20986..22305)
DNA (1320bp) protein (440aa)
type II restriction enzyme NmeDIP n=1 Tax=Sphingomonas melonis RepID=UPI000367A04F
Sphingomonas taxi strain 30a NODE_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26885.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein
scnpilot_cont_500_p_scaffold_493_25
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22500..22718
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GVV6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB04083.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
hypothetical protein
scnpilot_cont_500_p_scaffold_493_26
unknown

Not on your lists

comp(22838..23152)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_493_27
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23299..23955)
DNA (657bp) protein (219aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLZ6_9RHIZ
hypothetical protein; K06966 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_493_28
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24322..25809
DNA (1488bp) protein (496aa)
Beta-Casp domain-containing protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GAD8_9SPHN rbh
putative exonuclease; K07576 metallo-beta-lactamase family protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
putative exonuclease
scnpilot_cont_500_p_scaffold_493_29
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25926..26288
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039B2E87
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_493_30
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26390..26734
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A7BC10
Uncharacterized protein {ECO:0000313|EMBL:AJR26740.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
Displaying items 1-30 of 41 in total

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