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scnpilot_cont_500_p_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_545_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFA2_9SPHN
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CCA90977.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_cont_500_p_scaffold_545_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..810
DNA (291bp) protein (97aa)
Putative IS3 family transposase, IS150 group, OrfAB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJN3_RHITR
putative IS3 family transposase, IS150 group, OrfAB
Putative IS3 family transposase, IS150 group, OrfAB {ECO:0000313|EMBL:AGB70309.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
scnpilot_cont_500_p_scaffold_545_3
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1023..1178
DNA (156bp) protein (52aa)
Transposase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WGM2_9SPHN
Transposase {ECO:0000313|EMBL:EIZ79411.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2
IS4 family transposase
scnpilot_cont_500_p_scaffold_545_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1326..1790
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H629_CAUCN
hypothetical protein
Uncharacterized protein; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain NA1000 / CB15N).;"
scnpilot_cont_500_p_scaffold_545_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..2595
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028807A5
Uncharacterized protein {ECO:0000313|EMBL:ENY82755.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_cont_500_p_scaffold_545_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2721..4079)
DNA (1359bp) protein (453aa)
Transposase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IF87_9SPHN rbh
transposase
Transposase {ECO:0000313|EMBL:CCA90962.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y
scnpilot_cont_500_p_scaffold_545_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4292..5548)
DNA (1257bp) protein (419aa)
Glucose / Sorbosone dehydrogenase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ61_9SPHN rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15618.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..7796)
DNA (2238bp) protein (746aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ60_9SPHN rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15617.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_545_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7839..9047)
DNA (1209bp) protein (403aa)
PepSY-associated TM helix family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ66_9SPHN rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15623.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
PepSY-associated TM helix domain-containing protein
scnpilot_cont_500_p_scaffold_545_10
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9346..9834)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B79DAC
Uncharacterized protein {ECO:0000313|EMBL:EGY02407.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
scnpilot_cont_500_p_scaffold_545_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10041..11483
DNA (1443bp) protein (481aa)
amino acid permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5411E rbh
Amino acid permease-associated region {ECO:0000313|EMBL:EGY02386.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source
amino acid permease-associated protein
scnpilot_cont_500_p_scaffold_545_12
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11539..13035
DNA (1497bp) protein (499aa)
aldehyde dehydrogenase (EC:1.2.99.3)
betaine-aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48E08 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EGY02387.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillu
scnpilot_cont_500_p_scaffold_545_13
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13076..14368)
DNA (1293bp) protein (431aa)
D-amino acid oxidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40C3E rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EGY02388.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrosp
FAD dependent oxidoreductase
scnpilot_cont_500_p_scaffold_545_14
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14383..14805)
DNA (423bp) protein (141aa)
endoribonuclease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6BEFD
Putative translation initiation inhibitor {ECO:0000313|EMBL:EBA06720.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sa
endoribonuclease L-PSP
scnpilot_cont_500_p_scaffold_545_15
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14842..16014)
DNA (1173bp) protein (391aa)
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F388 rbh
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EGY02389.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" sourc
scnpilot_cont_500_p_scaffold_545_16
unknown

Not on your lists

comp(16034..16123)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_545_17
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16204..17205
DNA (1002bp) protein (334aa)
AraC family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3B1E2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY02390.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
scnpilot_cont_500_p_scaffold_545_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17207..17569)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60DC9
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15571.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17597..18100)
DNA (504bp) protein (168aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B519D9
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15579.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18152..18616)
DNA (465bp) protein (155aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B63823
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_21
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18777..20225)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6CB82 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM32639.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_cont_500_p_scaffold_545_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20650..21078
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6BFC6
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
scnpilot_cont_500_p_scaffold_545_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21143..22441)
DNA (1299bp) protein (433aa)
beta-lactamase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5DAF1 rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15573.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
scnpilot_cont_500_p_scaffold_545_24
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..23324)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B72E54 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGY02401.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
scnpilot_cont_500_p_scaffold_545_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23416..23802)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D22B
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15571.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24109..25446
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B45B4A rbh
hypothetical protein
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15577.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
scnpilot_cont_500_p_scaffold_545_27
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25533..26930
DNA (1398bp) protein (466aa)
beta-lactamase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B73D10 rbh
Beta-lactamase class C {ECO:0000313|EMBL:EGY02403.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillu
pbpE; beta-lactamase
scnpilot_cont_500_p_scaffold_545_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26943..28196)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F9E7 rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15575.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_cont_500_p_scaffold_545_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28446..30860
DNA (2415bp) protein (805aa)
ligand-gated channel protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B699DB rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15574.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_545_30
Pseudomonas cremoricolorata, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30857..31561
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B71532 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR91488.1}; TaxID=157783 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremor
Displaying items 1-30 of 68 in total

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