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scnpilot_cont_500_p_scaffold_624

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_624_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
2-nitropropane dioxygenase NPD n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VN41_CAUST
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADG11914.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter
scnpilot_cont_500_p_scaffold_624_2
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150..779)
DNA (630bp) protein (210aa)
MarC family transcriptional regulator n=1 Tax=Sphingomonas RepID=UPI0002882623
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
MarC family transcriptional regulator
scnpilot_cont_500_p_scaffold_624_3
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(821..1516)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUG6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK89689.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_624_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1516..2430)
DNA (915bp) protein (305aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=FOLD_NOVAD rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_cont_500_p_scaffold_624_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2427..2720)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IGE4_9SPHN
Integral membrane protein yggT {ECO:0000313|EMBL:GAO54560.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
hypothetical protein
scnpilot_cont_500_p_scaffold_624_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2921..3793
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H2B7_9SPHN
hypothetical protein; K03832 periplasmic protein TonB Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
TonB family protein
scnpilot_cont_500_p_scaffold_624_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3797..4708)
DNA (912bp) protein (304aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ARGB_NOVAD rbh
scnpilot_cont_500_p_scaffold_624_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4751..5422)
DNA (672bp) protein (224aa)
Membrane protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUH1_9SPHN rbh
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EQB15783.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
scnpilot_cont_500_p_scaffold_624_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5722..6402)
DNA (681bp) protein (227aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; TaxID=279238 species="Bacteria; Proteobacteria; Alphapr
guanylate kinase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E287AC rbh
scnpilot_cont_500_p_scaffold_624_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6446..6709)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:ABD25449.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_624_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6716..7213)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZ33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50654.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_624_12
unknown

Not on your lists

comp(7245..7487)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_624_13
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7561..8169
DNA (609bp) protein (203aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HY89_9SPHN rbh
scnpilot_cont_500_p_scaffold_624_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8162..8782
DNA (621bp) protein (207aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB29_9SPHN rbh
scnpilot_cont_500_p_scaffold_624_15
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8784..9512
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZZ91_9SPHN rbh
scnpilot_cont_500_p_scaffold_624_16
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9757..10521
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Novosphingobium sp. AP12 RepID=J2PA19_9SPHN rbh
imidazole glycerol phosphate synthase
scnpilot_cont_500_p_scaffold_624_17
unknown

Not on your lists

10653..10850
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_624_18
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10903..11241
DNA (339bp) protein (113aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Sphingobium sp. AP49 RepID=J2L5C4_9SPHN
scnpilot_cont_500_p_scaffold_624_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..11622
DNA (378bp) protein (126aa)
HIT-like protein {ECO:0000313|EMBL:AKH44086.1}; EC=3.-.-.- {ECO:0000313|EMBL:AKH44086.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; A
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E9176
hypothetical protein
scnpilot_cont_500_p_scaffold_624_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11687..12223
DNA (537bp) protein (179aa)
Acyl-CoA thioester hydrolase YbgC {ECO:0000313|EMBL:AKH44087.1}; EC=3.1.2.- {ECO:0000313|EMBL:AKH44087.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryt
Predicted thioesterase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8J2_ERYLH
thioesterase
scnpilot_cont_500_p_scaffold_624_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12220..12927
DNA (708bp) protein (236aa)
Cell division and transport-associated protein TolQ n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9L4_NOVAD rbh
MotA/TolQ/ExbB proton channel
Cell division and transport-associated protein TolQ {ECO:0000313|EMBL:ABD25459.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
scnpilot_cont_500_p_scaffold_624_22
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12931..13395
DNA (465bp) protein (155aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WFE0_9SPHN
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EIZ78908.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
biopolymer transporter TolR
scnpilot_cont_500_p_scaffold_624_23
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13400..14410
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBX5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57949.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_624_24
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15807
DNA (1401bp) protein (467aa)
Protein TolB n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J1Q7_9SPHN rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
translocation protein TolB
scnpilot_cont_500_p_scaffold_624_25
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15877..16419
DNA (543bp) protein (181aa)
Peptidoglycan-associated protein n=2 Tax=Novosphingobium RepID=F6IJX9_9SPHN
peptidoglycan-associated protein
Peptidoglycan-associated protein {ECO:0000313|EMBL:CCA91797.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
scnpilot_cont_500_p_scaffold_624_26
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16818..17282
DNA (465bp) protein (155aa)
Heat shock protein DnaJ-like protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C526_9SPHN
molecular chaperone DnaJ
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:EIZ78912.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
scnpilot_cont_500_p_scaffold_624_27
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17551..18411)
DNA (861bp) protein (287aa)
EamA-like transporter family n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEJ6_9BRAD
Transporter {ECO:0000313|EMBL:KFL32669.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_624_28
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18515..19897
DNA (1383bp) protein (461aa)
Putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXK1_AZOBR
putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term)
Putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term) {ECO:0000313|EMBL:CCD02610.1}; TaxID=1064539 species="Bacteria; Proteobacteria;
scnpilot_cont_500_p_scaffold_624_29
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19964..21190
DNA (1227bp) protein (409aa)
NAD(P)H-nitrite reductase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GPC2_9SPHN
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EZP76589.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_cont_500_p_scaffold_624_30
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21209..21979)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WE25_9CAUL
methionine aminopeptidase
Displaying items 1-30 of 44 in total

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