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scnpilot_cont_500_p_scaffold_48_3

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1820..2362)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000367C420 similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 163.0
  • Bit_score: 324
  • Evalue 6.90e-86
  • rbh
Conjugal transfer protein {ECO:0000313|EMBL:EGD59309.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 156.0
  • Bit_score: 292
  • Evalue 5.30e-76
type IV secretory pathway protease TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 180.0
  • Bit_score: 192
  • Evalue 1.20e-46

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCAGCGGTAAGTGAGAGCACGCCGATCACCGCGTCGCACCGCGCGTCCTGGCGGCTGAAGCTTGGCGGCATCGCGCTGTTTGGCGCCGCCGCGCTGGGGTGGTCGGCTCTCAAGGACTGGCACGACCATCATGCCTTCCTCATCAACGCCAGCACGTCACTGCCCAATTGGGCGTTGCTGGTCGAGACGGGACGCTTTCCAGCGCGCGGCGATTATGTGGTTTTCACGCCCGGCCATGATCCCCTTGTAGTCCGGCATTTCGGGACCGACCCCAAGCCCTTCGCCAAGATCGCCTATGGCGTGCCGGGCGATGCGGTGAGCCGCCAAGGCGCCGATGTGCTGGTCAACGGCCAGACTGTCGGTCACCTCAAGCCCAAGACCCATCAGGGCGAGGATCTGCTGCCCGGTCCCACCGGCACCATCCCTCAGGGGTGCATCTATGCCGGAAGCCCGCACAAGGACGGGTTCGACAGCCGCTATGCCGCAATCGGCTTTGTCTGCCGTGAACGGTTGATCGGCATTGGGACGCCCATTCTGTGA
PROTEIN sequence
Length: 181
MAAVSESTPITASHRASWRLKLGGIALFGAAALGWSALKDWHDHHAFLINASTSLPNWALLVETGRFPARGDYVVFTPGHDPLVVRHFGTDPKPFAKIAYGVPGDAVSRQGADVLVNGQTVGHLKPKTHQGEDLLPGPTGTIPQGCIYAGSPHKDGFDSRYAAIGFVCRERLIGIGTPIL*