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scnpilot_cont_500_p_scaffold_48_23

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(23205..24431)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D68541 related cluster n=1 Tax=unknown RepID=UPI0003D68541 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 414.0
  • Bit_score: 625
  • Evalue 3.30e-176
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETI63671.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 414.0
  • Bit_score: 625
  • Evalue 4.60e-176
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 389.0
  • Bit_score: 393
  • Evalue 7.80e-107

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGGCTGCCGATCCTTTCGAACTCAATTTGCGTCATCTGCGAGCGTTGCTGGCGATTGCTGAAAAGGGCAGCATCACTGCGGCTGCTGAAAGCGTGAGCCTCTCCCAACCCGCATTGACGCAGGGCCTCGCCAAGCTGGAACGACAGTTTGGTTATTCAATGTTTGAGAGGCGAGCCGGGGGGATGGTGCCTACGCCGATGGGCGTCATCGTCATCGAACGCACGCGGGCAGCGCTCGACCATCTATCCAATGCCGCGAAGGGCCTTTCTGCCGTCTTTCAATTTCCCGAGCGCTTGATGACGATGACCCAGTTGCGCGCTTTTCTGGCACTAGCCGAAGCTGGTGGATTTTCCGCTGCCGCCCATACAAGTGGCATGTCCCAGACCGCGGTCCATCGTGCAGTCAGCGATCTGGAGCATATGATTGGCGGGCAACTGGTTGAACGACGCGGGCGAGTCATATGGCTCAATGCGGCGGGCAAGCGCCTTGCGCGGGGTGCCCGCCTAGCCGCAACTGAAATTACCGCAGCTGTCGCCGACATGGGATTTGATAGCGGTGGAGAGCAGATCGCATTCGGTGCCCTCCCGCTGTCCCGTCCCTATCTTGTGCCCACGGCCATGGGGAGCATGACTCGAACTCATCCCCGCGCAGCCTTCAAGGTGCTCGAGGGTAGTTGGAAGGAAATGGTTGAGCCGCTGCGCGACGGCGAGATCGACATGATTGTCGGCGCTCTTCGTCCGTTCGATATCGCCGACCTTTATCAAATGCCGCTCTACGAAGATCGGTTGGTTATTGCCGCCGGAAGCAAACATCCGCTTGCTGGAGTGGAACAGCCGACTCTGGAGCAACTGGCCGCTTATCGCTGGATCGTGCCACCTACCAATTCCCCCTTGCGCGAGCAATGGGAACGGGTTTTCGATGGCACAACCACGCCGGAAACGCCAATCGAATGCGGTTCGGTGATGATCATCAGCCGGTTGCTGACGGATGGCGATTTCCTGACCTTGCTCTCACCCGATCAGGTTGCCTTACAGATCCGCAGCGGCCTTCTCACGCAGATTGGCGCGCCCCTAGACCGTAGCCGCCGCATGATGGGTATCACCACGCGGCGTAGCTGGCGGCCAACTGCCACGCAGCGCCATTTCCTCAATTGCCTCGAGCAGGCCGCAGCCGTCATGCGGCAGGAGTTTCCCCAGCCTGAGGAGCGCAACTCAGGCTGGGTCTAG
PROTEIN sequence
Length: 409
MAADPFELNLRHLRALLAIAEKGSITAAAESVSLSQPALTQGLAKLERQFGYSMFERRAGGMVPTPMGVIVIERTRAALDHLSNAAKGLSAVFQFPERLMTMTQLRAFLALAEAGGFSAAAHTSGMSQTAVHRAVSDLEHMIGGQLVERRGRVIWLNAAGKRLARGARLAATEITAAVADMGFDSGGEQIAFGALPLSRPYLVPTAMGSMTRTHPRAAFKVLEGSWKEMVEPLRDGEIDMIVGALRPFDIADLYQMPLYEDRLVIAAGSKHPLAGVEQPTLEQLAAYRWIVPPTNSPLREQWERVFDGTTTPETPIECGSVMIISRLLTDGDFLTLLSPDQVALQIRSGLLTQIGAPLDRSRRMMGITTRRSWRPTATQRHFLNCLEQAAAVMRQEFPQPEERNSGWV*