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scnpilot_cont_500_p_scaffold_8_119

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(152338..153297)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B68A08 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 292.0
  • Bit_score: 303
  • Evalue 2.20e-79
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK80968.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 296.0
  • Bit_score: 266
  • Evalue 4.30e-68
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 299.0
  • Bit_score: 260
  • Evalue 4.70e-67

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCGATTCAAGGGTCTCGATCTCAACCTGCTTCAGGTCCTCGACATGCTGATCGATCAGCGCAGCGTCACCCGCGCGGCCCAATTGCTGCATGTCAGCCAGCCCGCGATCAGCGCCGCGCTGGCACGGCTGCGGCTGCATTTCGAAGATCCGCTGCTGGTGCAGCATGGCAAGCGGATGATCCCGACGGCCTTTGCCCTGCGGCTGCAACCGGGCGTCAAATCGGTGCTGGGCGATCTGGAAGCGCTGGTCAACACGCCCGCCCATTTCGATCCGGCCACTTCCACGCGCCGGTTTCGGGTGATGGCCTCGGATTTCATTTTGGTCGCGGTGCTGGGCGATTTGTTGCCGCAAATCGAGCAGGAGGCGCCCGATGTGCGCCTGGATATCGTTTCGCCCCATGACAATGCGATTGCCATGCTGGAGGGCGGCGACGTCGACCTGCTGATCACCCCGCGCGATTATGTCAGCGACCGCCACCCTGCGGTCAATTTCTTTCAGGAGCGGCATGTGGTGGCCGGTTGGGCTGAAAACCCGTTGGTCCAGCGTGCGCCCGGTCTGGAGGATCTGCAGGCCGCGCGGTTCATATCGGTGCTGATCGGGCGCTCCGTCACTTCGTCCTTTGCCAATCACCAGCTTGCGCTTCAGGGCGTCACCATCAAAAATGCGCTGACGACCACCACTTTTGGCGTGGTGCCCCAATTGCTGGTGGGGACAGGGCGACTGGCGATCCTGCATGAATCGCTGGCGCGCAAGGCTGCCCAGCATCTGCCCATCCGTTACTGGCCGCTGCCCGTGGCCATTCCCGACATGCATGAGGCGATCCAATGCCATCGCGCACGGGCCAATGATCCCGCGATGGTCTGGCTGATCGATCGCCTGACGCAATGGTCGGCCGCCGTGATGGCGGAAAGGATGCCCGCTCTGCCGGCAGATATTGCAGTGTCTCCGGGCGCATGA
PROTEIN sequence
Length: 320
MRFKGLDLNLLQVLDMLIDQRSVTRAAQLLHVSQPAISAALARLRLHFEDPLLVQHGKRMIPTAFALRLQPGVKSVLGDLEALVNTPAHFDPATSTRRFRVMASDFILVAVLGDLLPQIEQEAPDVRLDIVSPHDNAIAMLEGGDVDLLITPRDYVSDRHPAVNFFQERHVVAGWAENPLVQRAPGLEDLQAARFISVLIGRSVTSSFANHQLALQGVTIKNALTTTTFGVVPQLLVGTGRLAILHESLARKAAQHLPIRYWPLPVAIPDMHEAIQCHRARANDPAMVWLIDRLTQWSAAVMAERMPALPADIAVSPGA*