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scnpilot_cont_500_p_scaffold_8_127

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(166558..167682)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LuxR n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9M5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 375.0
  • Bit_score: 239
  • Evalue 4.70e-60
Regulatory protein LuxR {ECO:0000313|EMBL:KHS48806.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 364.0
  • Bit_score: 563
  • Evalue 2.60e-157
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 376.0
  • Bit_score: 129
  • Evalue 1.90e-27

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
GTGACGGGCAGAGAGGAGCGGCAGCCGCCGGTGGATGACAACCAACTCATCGCCACGATGTATGGCGCGGTCGGCGAGGAATTGCGCTGGACCGCCGTTCTTGATGCGATAAAAATGCGGTTGGGCGTGGCCAGTGCCGTGTTTCAGAGCTTGGTTGCCGACAAGGACGACCTTGTCCCCTTCCTTTGTCGGCGCGACACATGGTCGACGCAGGAGGCCGAGCGCCACGATGCCTGGGCCAATTCGCCGCTCAACCCTCGCTTTCGCCGCGATACCGAACCGCAGGGGCAGGACGAGATCGAGAGCGACCAGCGCAGCCTTGCCTTCACCGCCGCCGACCGAGAGGCGTTACGTCTCGGTCTGGCCACCTGCGGTCTGGGGCCGGGGTTCTGGCTGGGGTGCAAGACCGCGCCGGGCGAACATACGACGATGATTTTTCATCGCCATGTCGGCGACGGGCGCGACATGACCGAGGCCGACCTGTATTTTCTGCAACAACTCCTGCCCCATTTCCAGCAGGTTTCGCTCCTGCTTGCCAAAATGGCCGGATATGACGCCCGTCTCGCCATGACCGAGGCTTTCATGGATTCCACCAGCCTTGCGCTGGTGGCCTGTGACCGGGATCTGGGCCTGCAATGGATGAATGCCGCCGCCGAAAGGCTGATCGACACATTGCCGCAGATCGCGCGCTCGGCCGGAAAGTTGCGCCTTCGCGCGATGGAGGCCGACCAGATGGTCCGGGAAACCATCCGGGGGCAGAAGGGGGATACCTGCCGCATTGCAGGGGATGAGCCTGCGCAAGTGCTGCATCTGCGCGTGCTGCGCCGTGATGCCGTTGACCGCCGCCGTCCGGGCAACAGCCTCGCGCTTGTTGCGCTCTGCTCGCCCGGCACAGCGCCCAGCATCAATGCGGCCGAGGTGGCCGATCTGTTCGGGCTGACCATGGCCGAGGCGATGCTGACCACGCATCTGGTGGGCGGCATGACGGTCAAGGATTTCGCCGCCCATCGCGGCATTGCCGAGGGCACGGCAAGGATGCAGCTCAAAAGCGCGCTGGCCAAGGCGGGCGTGGGGCGTCAGGCCGATCTGGTCCGCCAGGTCTGCCAGTCGCTCGCGCGGCTCTAG
PROTEIN sequence
Length: 375
VTGREERQPPVDDNQLIATMYGAVGEELRWTAVLDAIKMRLGVASAVFQSLVADKDDLVPFLCRRDTWSTQEAERHDAWANSPLNPRFRRDTEPQGQDEIESDQRSLAFTAADREALRLGLATCGLGPGFWLGCKTAPGEHTTMIFHRHVGDGRDMTEADLYFLQQLLPHFQQVSLLLAKMAGYDARLAMTEAFMDSTSLALVACDRDLGLQWMNAAAERLIDTLPQIARSAGKLRLRAMEADQMVRETIRGQKGDTCRIAGDEPAQVLHLRVLRRDAVDRRRPGNSLALVALCSPGTAPSINAAEVADLFGLTMAEAMLTTHLVGGMTVKDFAAHRGIAEGTARMQLKSALAKAGVGRQADLVRQVCQSLARL*