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scnpilot_cont_500_p_scaffold_8_519

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 666529..667110

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J3A516_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 193.0
  • Bit_score: 347
  • Evalue 6.30e-93
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL26736.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 190.0
  • Bit_score: 347
  • Evalue 1.50e-92
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 191.0
  • Bit_score: 267
  • Evalue 2.30e-69

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGAGAGCCAAGCGCGCCCTCACTGATCGCGAAAGTGCCATTCCGGCGCTGGCAGAAGCCTTCCGTGAACACGGGTTCGAGGGCGCGACCCTGGCCACCCTGTCCAAAGCCACCGGTCTTGGCAAAGGCAGCCTCTACAACTTCTTCCCCGGCGGGAAGGAGGAGATGATGGAGGCGGTCCTTGAAAATATCGACGGCTGGTTCGCCAAAGCGATTTTCTCGCCATTGGAGCATGGGTCTGATCCGTCAGCGGCTGTTACAGCCATGTTTGACGACGTGACCGCCTATTTCCGCTCCGGGAGGAGAGTATGCGTGGTCGGGTGCCTCGGGCTGAACTCTTCGGGCGAGACCTTCGCGATCAAGGTGAAGGATTACTTCGCACGCTGGATTTCGGCTTTGGCCCAATGTCTCGAAGCGGGGAAGGTGCCTCCGGCGATGGCCCTGGATCTGGCTGAAGAGGCGGTTTCCGGAATACAGGGGGCCATCGTCCTGGCACGGGCGCTTGGTGATGAGGCGAGCTTTCAACGGATCGTGCATCGCCTGCGGTCGACCTTGCTTGATACAATCGGCCGCTTTGGCTGA
PROTEIN sequence
Length: 194
LRAKRALTDRESAIPALAEAFREHGFEGATLATLSKATGLGKGSLYNFFPGGKEEMMEAVLENIDGWFAKAIFSPLEHGSDPSAAVTAMFDDVTAYFRSGRRVCVVGCLGLNSSGETFAIKVKDYFARWISALAQCLEAGKVPPAMALDLAEEAVSGIQGAIVLARALGDEASFQRIVHRLRSTLLDTIGRFG*