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scnpilot_cont_500_p_scaffold_18_2

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(607..1008)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B365D8 similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 127.0
  • Bit_score: 174
  • Evalue 6.60e-41
Transcriptional regulator lysR family {ECO:0000313|EMBL:GAO53593.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 132.0
  • Bit_score: 181
  • Evalue 9.80e-43
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 127.0
  • Bit_score: 150
  • Evalue 3.70e-34

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GTGCAACTCGGTCTTTATGCCCATCGCGACTATCTCGACCGGCGCGGCCTTCCGCAATCCATCGCCGAACTGCCCGGGCACGACCTGATCGGGGTGGACAGAAACAGCAGCCTTTCCCGCGCGATAACAGGCGCCCTGCCCGGCATCGAACACGGCGATTTCGCGCTGCGGGCGGACAACACAGTCGTCCATCTGGCCGCCATCCGTGCGGGATTTGGCATCGGCATCTGTCAAACACGCATTGCGGCCCGGGATAGCGCACTCGTGCAGGTTCTCCCGGATGCTTTCGTCTTCGGCCTACCGCTCTGGATTGTCATGCATGAAGACCTGCGAAGCAGTGCCCGATGCCGGACAGTGTTCAACATCCTTGCCGCCGATCTGCGATATGTCGTGAATGCGTGA
PROTEIN sequence
Length: 134
VQLGLYAHRDYLDRRGLPQSIAELPGHDLIGVDRNSSLSRAITGALPGIEHGDFALRADNTVVHLAAIRAGFGIGICQTRIAARDSALVQVLPDAFVFGLPLWIVMHEDLRSSARCRTVFNILAADLRYVVNA*