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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..312)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3Y8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60688.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_18_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(607..1008)
DNA (402bp) protein (134aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B365D8
Transcriptional regulator lysR family {ECO:0000313|EMBL:GAO53593.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1475..2425
DNA (951bp) protein (317aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3D014 rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AIT07895.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
scnpilot_cont_500_p_scaffold_18_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2460..3389)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U463_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61102.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_18_5
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3757..5424
DNA (1668bp) protein (556aa)
CopA family copper resistance protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3I3_9SPHN rbh
CopA family copper resistance protein {ECO:0000313|EMBL:EGD60797.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
CopA family copper resistance protein
scnpilot_cont_500_p_scaffold_18_6
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..6035
DNA (615bp) protein (205aa)
Copper resistance B n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3I4_9SPHN
Copper resistance B {ECO:0000313|EMBL:EGD60798.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
copper resistance protein CopB
scnpilot_cont_500_p_scaffold_18_7
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6032..6253
DNA (222bp) protein (74aa)
Copper resistance B n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJM7_9SPHN
Copper resistance protein CopB {ECO:0000313|EMBL:EXS71492.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
copper resistance protein CopB
scnpilot_cont_500_p_scaffold_18_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6621..8204
DNA (1584bp) protein (528aa)
Beta-lactamase-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHG2_9SPHN rbh
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:AJA11350.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
scnpilot_cont_500_p_scaffold_18_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8290..8805
DNA (516bp) protein (172aa)
Putative alcohol dehydrogenase cytochrome c subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8K9_9SPHN
Putative alcohol dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:EGD59016.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
cytochrome C family protein
scnpilot_cont_500_p_scaffold_18_10
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8836..10428
DNA (1593bp) protein (531aa)
Amine oxidase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C634_9SPHN rbh
Amine oxidase {ECO:0000313|EMBL:EIZ79297.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr
amine oxidase
scnpilot_cont_500_p_scaffold_18_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..12031
DNA (1590bp) protein (530aa)
flavin monoamine oxidase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E1636
amine oxidase, flavin-containing
Amine oxidase, flavin-containing {ECO:0000313|EMBL:ACJ01263.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhod
scnpilot_cont_500_p_scaffold_18_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12037..12450
DNA (414bp) protein (138aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQT5_9RHIZ
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:EIM26327.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; M
cytochrome C6
scnpilot_cont_500_p_scaffold_18_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12647..13939
DNA (1293bp) protein (431aa)
Putative chloride channel voltage gated family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z585_9SPHN rbh
Putative chloride channel voltage gated family protein {ECO:0000313|EMBL:EGD60263.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi
chloride channel voltage gated family protein
scnpilot_cont_500_p_scaffold_18_14
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15096..15806)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N783_RHILT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_18_15
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16163..16678
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C2Q9_9SPHN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
50S ribosomal protein L10
scnpilot_cont_500_p_scaffold_18_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17167
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHS6_9SPHN
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
50S ribosomal protein L7
scnpilot_cont_500_p_scaffold_18_17
unknown

Not on your lists

17221..17412
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..17820)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N4X6_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB01747.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_18_19
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18022..19845)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUJ8_9SPHN rbh
Diguanylate cyclase {ECO:0000313|EMBL:EZP51263.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. R
diguanylate cyclase
scnpilot_cont_500_p_scaffold_18_20
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19915..21135)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RI10_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKS70848.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. S
hypothetical protein
scnpilot_cont_500_p_scaffold_18_21
unknown

Not on your lists

21511..22128
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_22
unknown

Not on your lists

22388..22684
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22938..23894
DNA (957bp) protein (319aa)
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6EAAE rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:KHS48248.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
scnpilot_cont_500_p_scaffold_18_24
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24135..24515
DNA (381bp) protein (127aa)
ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Novosphingobium sp. AP12 RepID=J3AP71_9SPHN
Ribonuclease HI {ECO:0000313|EMBL:EJL35031.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
scnpilot_cont_500_p_scaffold_18_25
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24517..25266)
DNA (750bp) protein (250aa)
Membrane protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J5B5_9SPHN rbh
Membrane protein {ECO:0000313|EMBL:EQB33136.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense
hypothetical protein
scnpilot_cont_500_p_scaffold_18_26
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25387..26142
DNA (756bp) protein (252aa)
Sterol desaturase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GN32_9PSED
Sterol desaturase {ECO:0000313|EMBL:EJM69965.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
fatty acid hydroxylase superfamily protein
scnpilot_cont_500_p_scaffold_18_27
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26169..27149)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXB2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB17702.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_28
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27386..28918)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000371461D rbh
protein of unknown function (contains a RNA-dependent DNA polymerase domain)
Uncharacterized protein {ECO:0000313|EMBL:CCQ74719.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira s
scnpilot_cont_500_p_scaffold_18_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29318..29716
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B45DA9
Uncharacterized protein {ECO:0000313|EMBL:KHS43228.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_cont_500_p_scaffold_18_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29940..30092
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AQ51_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEZ21346.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
Displaying items 1-30 of 293 in total

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