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scnpilot_cont_500_p_scaffold_18_42

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 38818..39513

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HMJ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 231.0
  • Bit_score: 430
  • Evalue 8.80e-118
  • rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 231.0
  • Bit_score: 430
  • Evalue 1.20e-117
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 231.0
  • Bit_score: 424
  • Evalue 2.30e-116

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGGTCATAAGAGCAACCCTATCGGTCTGCGCCTGCAGATCAACCGCACCTGGGACAGCCGCTGGTATGCGGAAGGTCGCAGCTACGGCAAGCTTCTTGAGGAAGACCTCAAGATGCGCAAGTTCATCTTCAAGACGCTGCCCCAGGCTGCGATCTCGAAGGTGGTGATCGAGCGTCCCGCCAAGGTGTGCCGTGTGTCGATTTTCGCTGCCCGTCCGGGCGTGATCATTGGCAAGAAGGGTGCAGACATTGAAAAGCTGCGCCTTCAGCTCGCCAAGTTCACCGGCAGCGACGTCAAGCTGAACATCGTTGAAATCCGCAAGCCGGAAATCGACTCGAAGCTTGTCGCTCAGGGCATCGCCGATCAGCTGATCCGCCGTGTTGCCTTCCGTCGCGCCATGAAGCGCGCCGTTCAGTCCGCGCTGCGTCTTGGTGCTGAAGGCATCAAGATCACCTGCTCGGGCCGTCTGGGTGGCGCCGAAATCGCGCGTATCGAATGGTACCGCGAAGGCCGCGTTCCGCTGCACACCCTGCGTGCGAACATCGACTATGCCGAAGCCGAGGCGCTCACCGCCTATGGTATCATCGGCATCAAGGTGTGGATCTTCAAGGGCGAAATCCTTGGGCACGATCCGATGGCGCAGGACCGTCTCATGATGGAGGCCCAGACCTCCGGCGTGCGTCCTGCACGTTGA
PROTEIN sequence
Length: 232
MGHKSNPIGLRLQINRTWDSRWYAEGRSYGKLLEEDLKMRKFIFKTLPQAAISKVVIERPAKVCRVSIFAARPGVIIGKKGADIEKLRLQLAKFTGSDVKLNIVEIRKPEIDSKLVAQGIADQLIRRVAFRRAMKRAVQSALRLGAEGIKITCSGRLGGAEIARIEWYREGRVPLHTLRANIDYAEAEALTAYGIIGIKVWIFKGEILGHDPMAQDRLMMEAQTSGVRPAR*